Parasphingopyxis sp. CP4: HFP51_02780
Help
Entry
HFP51_02780 CDS
T09836
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
parp
Parasphingopyxis sp. CP4
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parp03009
]
HFP51_02780 (rimO)
Enzymes [BR:
parp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HFP51_02780 (rimO)
Ribosome biogenesis [BR:
parp03009
]
Prokaryotic type
ribosomal protein modification factors
HFP51_02780 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QLC21204
LinkDB
All DBs
Position
complement(557432..558769)
Genome browser
AA seq
445 aa
AA seq
DB search
MATRIPSPPKVGMVSLGCPKALVDSERILTKLRSDGYGLSPDYDDADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGNEADVIRDRFPDVLAVSGPQQYEEVVGAVHEAAPM
PPSPYVDLVPETGLKLTPRHYSYVKISEGCNHRCAFCIIPSIRGDLVSRRPDAVLREAEK
LVAAGTKELLIISQDTSAYGVDIRKEERQWKGRTIQPHMTDLARELGQLGAWVRLHYVYP
YPHVDQVIPLMADGLITPYLDIPFQHASPRILKAMRRPANEAKVLERVAAWREICPDLTI
RSTFITGFPGETDEDFEYLLEWLDEAQLDRVGAFRFEPVEGARANALPDPVPDEVTEERY
KRLMEKCAEISAAKLQAKIGSTQKVIIDLVDEDGGATGRSQADAPEIDGEVHLRDTQGLE
PGDIISAVIEDADAHDLFGVPVGNP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgcatcccctccccgcccaaggtcggcatggtctcgctcggctgtcccaag
gccttggtcgatagcgagcgtatcctgaccaagctgcgatccgacggctatggcctgtcg
cccgactatgacgatgcggacgtcgtactggtcaacacgtgcggtttcctcgacagcgcc
aaggaagaaagccttgaagcgattggtgaggccattgccgaaaatggccgcgtgatcgtc
accggatgcatggggaacgaggcggacgtcatccgcgaccgtttccctgatgtgctcgcc
gtatcgggcccccagcaatatgaagaggtggtcggtgccgtacatgaggccgcgccgatg
ccgccgtcgccttatgtcgatctggttcccgaaacggggctcaagcttacgccgcgccac
tatagctatgtgaagatctcagaaggctgcaatcatcgctgcgccttctgcatcattccc
tcgatccgcggcgatcttgtcagtcggcgccccgatgctgtgctgcgcgaagcagaaaaa
ctggttgcagctgggaccaaagaactgctgatcatcagccaggacacgtccgcctatggc
gtcgatatccgcaaggaagagcggcaatggaaaggccgcacgatccagccccatatgacg
gatcttgcgcgcgaactgggccagttgggcgcctgggtccgactccattatgtctacccc
tatccgcatgtcgatcaggtcatcccgttaatggctgatggtttgatcacaccctatctc
gatattcccttccagcatgccagcccgcgtatcctgaaagccatgcgccgcccggcgaac
gaggcgaaggtgcttgagcgcgttgctgcgtggcgcgaaatctgtcccgacctcacaatc
cgatcgaccttcatcaccgggttccctggcgagaccgatgaagatttcgaatatctgctc
gaatggctcgacgaagcgcagttggaccgggtcggcgcattccgctttgaaccggtcgaa
ggcgcgcgtgccaatgccctgcccgatccggtgcctgatgaagtgactgaagagcgctac
aagcgcctgatggaaaaatgcgccgagatttcagcagcaaaactccaggccaagatcgga
tcaacgcagaaggtcattattgaccttgttgacgaagatggcggggcgacgggtcgctct
caggcagacgccccagaaatcgacggtgaggtccatctgcgcgacacccaagggctagaa
cccggcgacatcatttcagccgtgatcgaagatgccgatgcgcatgacctgtttggcgta
ccggttggcaatccctaa
DBGET
integrated database retrieval system
