Paracoccus sp. Arc7-R13: EOJ32_04110
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Entry
EOJ32_04110 CDS
T06050
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
parr
Paracoccus sp. Arc7-R13
Pathway
parr00300
Lysine biosynthesis
parr01100
Metabolic pathways
parr01120
Microbial metabolism in diverse environments
parr01230
Biosynthesis of amino acids
Module
parr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EOJ32_04110
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
parr01002
]
EOJ32_04110
Enzymes [BR:
parr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
EOJ32_04110
Peptidases and inhibitors [BR:
parr01002
]
Metallo peptidases
Family M20
EOJ32_04110
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AZY92951
UniProt:
A0A3T0PZ62
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Position
825979..827118
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AA seq
379 aa
AA seq
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MPDAADLTARLIRCPSVTPEEGGALVLLQEMLEEAGFDCHRVDRNGTPNLFARWGAKGAR
AMGFNGHTDVVPPGDPASWTHPPFSGHWDADDVIWGRGATDMKSGVAAFVCAAVDFVRQT
PPDGAVILTITGDEEGPSRDGTIALLDWMAANDERMEACIVGEPSNPEVMGEMMKIGRRG
SATYTITAKGRQGHAAYPHKALNPLHALTRYLADLTAEPLDQGTDHFDPSGLQITTIDCG
NPASNVIPEKAVAVVNIRFNDLHTGAGLLDRLRDRAAAVQEQTGVTLRVEAQISGEAFLT
APGPFVDMVRGVVQQETNRQPVLSTSGGTSDARFVKDHCPVVEFGLVGAHMHQVDERVPA
QQVRQLQVIYQRILERFFA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgccgccgacctgaccgcccgcctgatccgctgcccctcggtcacgcccgag
gagggcggcgccctggtcctgctgcaggagatgctggaggaggcgggcttcgactgccac
cgcgtcgaccgcaacggcacgccgaacctgttcgcgcgatggggcgccaagggggcgcgg
gccatgggcttcaacgggcataccgacgtggtgccgccgggtgatccggcatcctggacg
catccgccgttctccggccactgggacgcggacgacgtgatctggggccggggcgccacc
gacatgaaatccggggtcgcggcctttgtctgcgccgcggtggatttcgtgcgccagacg
cccccggacggggccgtgatcctgaccatcaccggcgacgaggaaggcccgtcccgagac
ggtaccatcgccctgctggactggatggccgcgaacgacgaacgcatggaagcctgcatc
gtcggagagccgtcgaaccccgaggtgatgggagagatgatgaagatcggccggcgtgga
tcggccacctacaccatcaccgccaagggtcgtcaggggcatgccgcctatccgcacaag
gcgctgaacccgctgcacgcgctgacccgctatctggccgacctgaccgccgagccgctg
gaccaggggacggatcatttcgacccctcggggctgcagatcaccacgatcgactgcggc
aaccccgcgtcgaacgtgatcccggaaaaggcggtggcggtggtcaacatccgcttcaac
gacctgcataccggggcgggcctgctggaccgcctgcgcgaccgcgcggcggcggtgcag
gagcagaccggcgtgacgctgcgcgtcgaggcccagatctcgggcgaggcgttcctgacc
gcgcccggccccttcgtcgacatggtgcgcggcgtcgtccagcaggagacgaaccggcag
ccggtcctgtccacatcgggcggcacctcggacgcgcgcttcgtcaaggatcactgcccg
gtggtggaattcgggctggtcggtgcccacatgcaccaggtggacgaacgtgtccccgcc
cagcaggtccgccagctgcaggtgatctatcagcgtatcctggaaaggttctttgcatga
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