Paraglaciecola sp. T6c: Patl_3384
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Entry
Patl_3384 CDS
T00372
Name
(GenBank) protein of unknown function DUF752
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pat03016
]
Patl_3384
Enzymes [BR:
pat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Patl_3384
Transfer RNA biogenesis [BR:
pat03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Patl_3384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox_2
GIDA
F420_oxidored
FAD_binding_2
3HCDH_N
Ldh_1_N
NAD_binding_9
PALP
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABG41890
UniProt:
Q15QE8
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All DBs
Position
4059136..4061253
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AA seq
705 aa
AA seq
DB search
MTIKTADIQFNADGTPIATNFDDVYFSSFDGAAETEYVFLHNNLLPQRWQQWSKPTFVIA
ETGFGTGLNLLVTLAVFKQHLAQHPASTFTLHYISTEKFPLTHTDLVQALNAFVQFEDDA
KALIAQYPMPLDGCHRMSFLNNRVIVDLWLGDIHDSLPQWHTNENGLVDAWYLDGFAPSK
NPQMWSPQLFEQMARLASNGCTFATFTAAGFVKRGLRDAGFEVEKRKGHGRKREMLAGII
ARELETKVNRQQARYYQRGAYMNSTSVNTRCAENHAQTALASKPKVAIIGAGIAGASMAY
AMAKKGYDCDIYFNDATPAQGASGNPQAGFYPQLNVDASHASQINAHSFVYAANQYRQLQ
SQGFHFAHQWCGVLQLGFKPALAERYAKLTESQLWPGELVRYVKPSEAAQLANCEMPYSG
LFMPLGGWIDPAQLVDALFDAAAKLSQVRLYSHHALNGIEQKNVSITAQENTRWQLHFEA
SEATSGMNKNTSLAQADIVIYATGAQSHDIAALADFPLRMVRGQVEAVPTQTALSKLNTV
LCHKGYLTPEYNGQHALGSTYVKNDLSTDYRLSEQDKNLATHYQSLSDCQWAQEVVGNAQ
GRAAVRCSSPDHLPLVGALADIEKQKKELSDLYKALPLSYYPKGSNMNNVFVLTGLGSRG
LTTAPLMAEVLASQISGQPLPMANDLLNTLNPNRFLIRQLIRREV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgaccattaaaacagcagatattcagtttaacgctgatggcacgccaatcgccacgaat
tttgatgacgtgtatttttcatcttttgacggcgccgcagaaaccgaatatgttttttta
cacaataatctgttgcctcagcgttggcagcaatggtcaaagcctacctttgttattgct
gaaacaggcttcggtactgggcttaacttattagtgacactggctgtatttaaacagcat
ttggctcaacaccctgctagtacatttaccctgcactatatcagtacggaaaaattcccc
ctcacccatacagacttagtccaagcgcttaatgcttttgttcaatttgaagatgacgct
aaggcattaattgctcaatatcctatgccactcgatggttgccatcgtatgtcttttcta
aacaaccgcgtcattgtcgatctatggctaggtgatatacatgactcattaccccaatgg
cacaccaatgaaaacggtttagtggacgcctggtatttagatggatttgcccccagcaaa
aacccacaaatgtggtccccccagctgtttgaacaaatggcccgcttagccagtaacggc
tgcaccttcgctacctttaccgctgctggttttgttaagcgtggcttacgtgatgcaggc
tttgaagtagagaaacgcaaaggacacggccgcaagcgagaaatgcttgcaggcattatc
gccagagagcttgaaacgaaagtcaatcgtcagcaagcccgttattatcaacgcggcgct
tatatgaattctacgtctgtaaatactcgctgtgcagaaaatcacgcgcaaacagcttta
gcgagtaagcccaaagtcgcgattatcggagccggtattgcaggggccagcatggcctat
gccatggcaaaaaaaggctatgactgtgatatttattttaacgatgcgacccctgcacaa
ggcgcatcgggaaatccccaagccgggttttatccacaactcaatgtggatgcgagccat
gccagtcagattaatgctcacagttttgtgtatgccgccaaccagtatcgacagcttcag
tctcaaggttttcacttcgcgcaccaatggtgcggtgtgttgcaattgggttttaagcct
gcgctagcagagcgttatgcaaaactgaccgaaagccaattatggcccggtgagctagta
aggtatgttaagcctagcgaagccgcacaattagccaactgcgagatgccatacagtggt
ttgtttatgccactcggcggttggatagatccagcacaactggtcgatgccctattcgat
gctgcagcgaaattgagtcaggtgaggttatatagccatcatgcactcaacggcatagag
caaaaaaatgtctcaattaccgcgcaagagaacacacgctggcaattacattttgaagcg
tcagaggccacttctggaatgaataaaaatactagcttagcccaggctgacattgtgatt
tatgccaccggtgcacaaagtcatgacatagcagcgctcgcggattttcctctgcgcatg
gtgcgaggccaagttgaagcggtgccgactcaaacggcgcttagtaaattaaataccgtg
ctatgtcataaaggctatttaaccccggaatataacggccagcatgcgctaggctcaacc
tatgtgaaaaatgatttaagcactgattaccgcctaagcgagcaagacaaaaatttagcc
acccattatcaatcactgtcagactgccaatgggcgcaagaagtggtggggaacgcacaa
ggccgagcagcagtgcgttgcagttcgccggatcacttacctttggtgggggcattagca
gatattgagaagcaaaagaaagaattaagcgatttgtacaaagccctgcccttaagctat
tacccaaaaggcagcaatatgaataacgtatttgttctcacagggcttggctctcgtggg
ttaactacggcgccgttaatggctgaagtactcgccagccaaatcagcggacagccactg
ccaatggcaaatgatttattaaacaccctaaacccgaatcgttttttaatccgccagctg
atccgccgagaagtttaa
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