Pseudomonas atacamensis: JWU58_09105
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Entry
JWU58_09105 CDS
T07336
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00907
Pinene, camphor and geraniol degradation
pata01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JWU58_09105
Enzymes [BR:
pata01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
JWU58_09105
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
ATP-grasp_3
HlyD_D23
DUF3182
DNAPolymera_Pol
Motif
Other DBs
NCBI-ProteinID:
QSL89430
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Position
complement(1979640..1981601)
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AA seq
653 aa
AA seq
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MPTLHKILIANRGEIACRIQRTAQALGYRTVAVFSDADADALHVQMADQAVHIGPAPVQQ
SYLNIAAILDAARRSGADAIHPGYGFLSENADFARACAEAGLIFIGPSVEAIELMGSKRL
SKIAMLDAGVPCIAGYQGAAQDDATLLAEAERIGYPLMIKASAGGGGRGMRLVHEASELA
AQLRTARSEAMNGFGSDELILEQALIEPRHVEVQLFGDQHGHLVYLGERDCSIQRRHQKV
IEEAPCPVMTAELRQAMGEAALKAGRAVDYVGAGTVEFLLDARGQFYFLEMNTRLQVEHP
VTELITGLDLVAWQLLVAEGQPLPLTQEQIRLDGHAMEVRLYAEDPAADFLPQTGRIAAW
QPASDHGARIDHGLLEGQSVSPFYDPLLGKLIAHGATREEARRKLLRAVQDTVLLGVQSN
QRLLEGLLQHPQFISGDFSTAFIQEHFSSHASLNTYVPTTAQLAIAVVLFYQASALPHRA
PLNGWRNNASVPLHYRLGSDEQDWTLSVLARKTGELVVQAGESTVAVKIIEHAAQSITIE
VDGLRQRHAYRLHDRLLWLFTHPGSLRLEDRTHAPIDSQTSVASGTLKAPMDGAIVDVLV
SEGSTVSKGQLLVVLEAMKMEHPLKAGIDGVLKRVQVKVGDQVKNRQVLLQVE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctccacaaaatcctgatcgccaaccgcggtgaaatcgcctgccgcatccag
cgcacggcccaggcgctgggttatcgcaccgttgccgttttcagcgacgccgacgccgat
gcgctacacgtgcagatggccgaccaagccgtacacatcggcccggcgccggtgcagcag
tcgtacctcaacattgcggcgatcctcgacgccgcccgccgcagcggcgccgacgcgatt
cacccgggctacggcttcctctcggaaaacgccgatttcgctcgcgcctgcgccgaagcc
gggctgattttcatcggccccagcgtcgaagcgatcgaactgatgggcagcaaacgcctg
tcgaaaatcgccatgctcgacgccggcgtgccgtgcattgccggctatcaaggcgcagcg
caggacgacgcgacgctgctggccgaagccgagcgcatcggttatccgctgatgatcaag
gccagcgccggcggcggaggacgcggcatgcgcctggtccacgaggccagcgaactggcg
gcgcaactgcgcaccgcgcggtccgaagcaatgaacggtttcggcagcgacgagttgatt
ctcgaacaggcattgatcgaaccgcgccacgtcgaagtgcaattgttcggcgaccagcac
ggccatctggtctatctcggcgaacgcgattgctcgatccagcgccgccatcagaaagtc
atcgaagaagcgccgtgcccggtgatgaccgccgagctgcgccaggccatgggcgaagca
gcactcaaggccgggcgcgcggtggattacgtcggcgctggcaccgtggagttcctgctc
gacgcgcgcggccagttctactttctggagatgaacacccgcctgcaggtcgagcatccg
gtgacggaattgatcaccggcctcgatctggtcgcgtggcaactgctggttgccgagggc
cagccgttaccgctgacgcaggagcagatccgtctcgacggtcacgccatggaagtgcgc
ctctacgctgaagatcccgctgcggattttcttccgcaaaccggccgaattgccgcatgg
caaccggcttcggatcacggtgcgcgcatcgatcacggtctgcttgaaggtcagtcggtc
agcccgttctacgacccgctgctgggcaaactgatcgcccacggcgccacccgcgaagag
gcgcgacgcaaattgttgcgtgcggtgcaggacaccgtgctgctcggcgtgcaaagcaat
caacgcttgctcgaaggcctgctgcaacatccgcagttcatcagtggcgatttcagcacc
gccttcatccaagaacatttttccagccatgccagcctaaacacttatgtgccgacaacg
gcgcaactggcgattgccgtggtgttgttctatcaggccagcgccctgccccatcgcgcc
ccattgaatggctggcgcaacaacgccagcgtgccgttgcactatcgactcggcagtgac
gagcaggactggacgctgtcggtgctggcgcgcaaaaccggcgagttggtcgtgcaggct
ggcgaaagcactgtggcggtgaaaatcattgagcacgccgcgcaatcaatcaccatcgaa
gtcgacggcctgcgccagcgccacgcctatcgtctgcacgatcggctgctgtggctgttc
acccatccgggcagcctgcgcctggaggatcgaactcatgcgccgatcgacagtcagacc
agcgtcgcctccggcaccctgaaagccccgatggacggtgccattgtcgatgtgctggtc
agcgaaggcagtacggtcagcaagggtcaattgctggtggtactggaggcaatgaaaatg
gagcatccgttgaaggccggcatcgatggcgtgctcaaacgggtgcaagtgaaggtcggc
gatcaggtaaaaaatcgtcaggttctgttgcaggtcgagtag
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