Pseudomonas atacamensis: JWU58_19580
Help
Entry
JWU58_19580 CDS
T07336
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00020
Citrate cycle (TCA cycle)
pata00640
Propanoate metabolism
pata00660
C5-Branched dibasic acid metabolism
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01120
Microbial metabolism in diverse environments
pata01200
Carbon metabolism
Module
pata_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pata_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JWU58_19580 (sucD)
00640 Propanoate metabolism
JWU58_19580 (sucD)
00660 C5-Branched dibasic acid metabolism
JWU58_19580 (sucD)
Enzymes [BR:
pata01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JWU58_19580 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSL86354
LinkDB
All DBs
Position
complement(4296744..4297628)
Genome browser
AA seq
294 aa
AA seq
DB search
MSVLINKDTKVICQGITGSQGSFHTQQAIEYGTKMVGGVTPGKGGTEHLGLPVFNTVKDA
VAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELGVVLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWEVKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaagttatctgccagggtattaccggttcgcaa
ggtagtttccacacccagcaagccattgaatacggcaccaagatggttggcggcgtaact
ccgggcaaaggcggcaccgagcacctgggtctgccagtgttcaacaccgttaaagacgca
gtagctgccaccggcgctaccgccagcgtgatctacgttccggctccgttctgcaaggac
tcgatcctggaagcggcattcggcggcatcaagctgatcgtctgcatcaccgaaggcatt
cctaccctggacatgctggacgccaaagttaagtgcgacgagctgggcgtagtcctgatc
ggccctaactgcccaggcgtgatcaccccaggcgaatgcaagatcggcatcatgccaggt
cacattcacttgccaggcaaggtcggtatcgtttcgcgttccggcaccctgacctacgaa
gctgtgaagcagaccactgacgccggtttcggtcagtcgacttgcgtcggcatcggcggt
gacccgatcccgggttcgaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaggcgatcgtgatgatcggcgagatcggcggttcggctgaagaagaagcggctgcc
tacatcaaggctaacgtgaccaagccggttgtttcctacatcgctggtgtgactgctcct
ccgggcaagcgcatgggccatgctggcgcaatcatctctggcggcaaaggcactgcagac
gagaaattcgctgcgctgcaagacgcaggcgtaaaaaccgtgcgttcgctggcagacatc
ggcaaggccctggccgagctgactggctgggaagtgaagaagtaa
DBGET
integrated database retrieval system
