Pseudomonas atacamensis: JWU58_23495
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Entry
JWU58_23495 CDS
T07336
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00330
Arginine and proline metabolism
pata00480
Glutathione metabolism
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JWU58_23495
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JWU58_23495
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
JWU58_23495
Enzymes [BR:
pata01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
JWU58_23495
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QSL87111
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Position
5141522..5142685
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AA seq
387 aa
AA seq
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MSIQVEDYFARATFDKMKAFADKQETPFVVIDTAMIAQAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLKDKGSSFDIASIYELDKVMDRGVSPDRISYGNTIKKSKDIRYFYEKGVRLFS
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIQLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccaggtcgaagactatttcgcgcgcgctacattcgacaaaatgaaggcgttc
gccgacaaacaggaaaccccgttcgtggtgatcgacaccgccatgatcgcccaggcctac
gatgacctgcgcgccggtttcgaattcgccaaggtctactacgcggtcaaggccaacccg
gccgtcgagatcatcgacctgctcaaagacaagggttcgagcttcgatatcgcctcgatc
tacgagctggacaaagtcatggatcgcggcgtcagcccggaccgtatcagctacggcaac
accatcaagaaatccaaggacatccgctacttctacgagaagggcgtgcgtctgttctcc
accgactccgaagccgacctgcgcaacatcgccaaggctgcaccgggttcgaaagtctat
gtgcgcatcctcactgaaggctcgaccaccgctgactggccactgtcgcgcaagttcggc
tgccagaccgacatggccatggacctgctgatcctcgctcgcgacctcggtctggtgcca
tacggcatctcgttccacgtcggttcgcaacagcgcgatatcagtgtctgggacgcggcg
atcgccaaggtcaaagtgatcttcgaacgtctgaaagaagaagacggcatccaactcaag
ctgatcaacatgggcggcggcttcccggccaactacatcacccgcaccaacagcctggaa
acctacgccgaagaaatcatccgcttcctcaaggaagatttcggtgatgacctgccggaa
atcatcctcgagccgggccgttcgctgattgccaacgccggtattctggtcagcgaagtt
gtactggttgcacgcaagtcgcgcactgccgtcgagcgctgggtgtataccgatgtgggc
aagttctccggcctgatcgaaaccatggacgaagcgatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaagtcgtcatcgccggcccgacctgcgacagcgccgacatc
atgtacgagaactacaagtacggcttgccgctgaacctggcgattggtgatcgtctgtac
tggttgtcgaccggtgcgtataccaccagttacagcgcggtcgagttcaatggcttcccg
ccgctgaagtcgttttacgtttaa
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