Pseudomonas atacamensis: JWU58_25655
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Entry
JWU58_25655 CDS
T07336
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00730
Thiamine metabolism
pata01100
Metabolic pathways
pata01240
Biosynthesis of cofactors
pata04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JWU58_25655 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JWU58_25655 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pata03016
]
JWU58_25655 (thiI)
Enzymes [BR:
pata01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JWU58_25655 (thiI)
Transfer RNA biogenesis [BR:
pata03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JWU58_25655 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
QSL87518
LinkDB
All DBs
Position
complement(5673452..5674906)
Genome browser
AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRTKFIRQLAKNIRTVLRDLDPAVVVNGVWDNLELETRVTDPK
ALKEMGERLTCMPGIAHFLQIDEYPLGDFDDITEKCKQHYGDALAGKIFSVRCKRAGKHA
FSSMDVEKYVGSKLRRECGAAGIDLKAPQIEVRIEVRDKRLFVIHSQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRASSEIAERLHIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIVAHKQDIIDTANEIGTADFARHMPEYCGVISVNPKTAAKRG
RVEHEEKEFDMAVLERALANAKLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAA
EDDPLELAGIEVQTMPFYAVNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatcgtaaaagtcttccccgagatcaccatcaaaagccgacctgtccggacg
aaattcatccgccagttggccaagaacatccgcaccgtgctccgtgacctggacccggcc
gtggtggtgaacggcgtgtgggacaatctcgagctggaaacccgcgttaccgaccccaaa
gccttgaaggagatgggcgagcgcctgacctgcatgccgggtatcgcgcactttctgcag
atcgacgagtacccgctgggcgacttcgacgacatcaccgagaagtgcaaacagcactac
ggcgatgcgctggccgggaagattttctcggtgcgctgcaagcgcgcaggcaagcatgcg
ttcagctcgatggacgtggaaaaatacgtcggcagcaagctgcgtcgtgagtgcggtgcg
gccggaatcgaccttaaagcgccgcaaatcgaagtccgtatcgaagttcgcgacaaacgg
ttgttcgtgattcacagccagcacaacggcatcggcggctatccgctcggcgcgttggag
cagacgctggtattgatgtccggcggcttcgattcgaccgtggcggcttaccagatcatg
cgtcgcggcctgatggcgcacttctgcttcttcaatctcggcgggcgtgcccacgaattg
ggcgtgatggaagtcgcgcacttcatctggaagaagtacggcagctcgcaacgcgtgcta
tttgtcagtgtgccgttcgaggaagtgctgggcgaaattctcggcaaagtcgataacagt
catatgggcgtggttttgaagcgtatgatgttgcgcgcctcgtccgagatcgccgaacgc
ctgcacatcgatgcactggtgaccggtgaagcgatctcccaggtgtcgagccagacgctg
ccgaacctgtcggtgatcgactgcgtgaccgacaaactggtgctgcgaccgctgatcgtc
gcgcacaagcaggacatcatcgacaccgccaacgagatcggcaccgccgatttcgcccgg
cacatgccggaatattgcggcgtgatttcggtcaaccccaagactgccgccaagcgtggc
cgggttgagcacgaagagaaagaattcgacatggcggtactcgagcgtgcgctcgccaac
gccaaactggtgccgatcgatcgggtaatcgacgagttgggccaggatttgcaaattgaa
gaagtcagcgaagcgctggccggtcagatcgtcatcgacatccgccacccggatgccgcc
gaggatgacccgctggagctcgccggcatagaggtacagacgatgccgttctatgcagtg
aacgcacgtttcaaggaactggaccctactcgccagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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