KEGG   PATHWAY: atx00010
Entry
atx00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Acidithiobacillus thiooxidans
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
atx00010  Glycolysis / Gluconeogenesis
atx00010

Module
atx_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:atx00010]
atx_M00002  Glycolysis, core module involving three-carbon compounds [PATH:atx00010]
atx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:atx00010]
Other DBs
GO: 0006096 0006094
Organism
Acidithiobacillus thiooxidans [GN:atx]
Gene
GCD22_03421  glcK; ROK family transcriptional regulator [KO:K25026] [EC:2.7.1.2]
GCD22_03521  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GCD22_01594  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GCD22_02079  fruK; carbohydrate kinase [KO:K16370] [EC:2.7.1.11]
GCD22_00261  fbp; fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
GCD22_03669  glpX; fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
GCD22_03674  fba; fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
GCD22_00566  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
GCD22_03671  gapA; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GCD22_03672  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GCD22_03224  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
GCD22_01310  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
GCD22_02943  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GCD22_02082  eno2; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GCD22_03673  pykA; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GCD22_02081  pki; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GCD22_01311  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
GCD22_02019  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
GCD22_02074  pdhA; dehydrogenase [KO:K00161] [EC:1.2.4.1]
GCD22_00164  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
GCD22_02075  pdhB; alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
GCD22_00165  pdhB; pyruvate dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
GCD22_02076  lta2; 2-oxo acid dehydrogenase [KO:K00627] [EC:2.3.1.12]
GCD22_01300  gor; pyridine nucleotide-disulfide oxidoreductase [KO:K00382] [EC:1.8.1.4]
GCD22_02070  acoL; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GCD22_00166  pdhD; pyruvate dehydrogenase [KO:K00382] [EC:1.8.1.4]
GCD22_03728  adhI; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GCD22_02946  yahK; zinc-binding dehydrogenase [KO:K13979] [EC:1.1.1.2]
GCD22_01400  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
GCD22_03039  pgm; alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
GCD22_02629  yeaD; D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
atx00020  Citrate cycle (TCA cycle)
atx00030  Pentose phosphate pathway
atx00500  Starch and sucrose metabolism
atx00620  Pyruvate metabolism
atx00640  Propanoate metabolism
atx00710  Carbon fixation in photosynthetic organisms
KO pathway
ko00010   
LinkDB

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