KEGG   PATHWAY: avv01100
Entry
avv01100                    Pathway                                
Name
Metabolic pathways - Agrobacterium vitis VAT03-9
Class
Pathway map
avv01100  Metabolic pathways
avv01100

Module
avv_M00002  Glycolysis, core module involving three-carbon compounds [PATH:avv01100]
avv_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:avv01100]
avv_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:avv01100]
avv_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:avv01100]
avv_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:avv01100]
avv_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:avv01100]
avv_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:avv01100]
avv_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:avv01100]
avv_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:avv01100]
avv_M00012  Glyoxylate cycle [PATH:avv01100]
avv_M00015  Proline biosynthesis, glutamate => proline [PATH:avv01100]
avv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:avv01100]
avv_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:avv01100]
avv_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:avv01100]
avv_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:avv01100]
avv_M00021  Cysteine biosynthesis, serine => cysteine [PATH:avv01100]
avv_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:avv01100]
avv_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:avv01100]
avv_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:avv01100]
avv_M00026  Histidine biosynthesis, PRPP => histidine [PATH:avv01100]
avv_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:avv01100]
avv_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:avv01100]
avv_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:avv01100]
avv_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:avv01100]
avv_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:avv01100]
avv_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:avv01100]
avv_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:avv01100]
avv_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:avv01100]
avv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:avv01100]
avv_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:avv01100]
avv_M00082  Fatty acid biosynthesis, initiation [PATH:avv01100]
avv_M00083  Fatty acid biosynthesis, elongation [PATH:avv01100]
avv_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:avv01100]
avv_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:avv01100]
avv_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:avv01100]
avv_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:avv01100]
avv_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:avv01100]
avv_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:avv01100]
avv_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:avv01100]
avv_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:avv01100]
avv_M00140  C1-unit interconversion, prokaryotes [PATH:avv01100]
avv_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:avv01100]
avv_M00149  Succinate dehydrogenase, prokaryotes [PATH:avv01100]
avv_M00151  Cytochrome bc1 complex respiratory unit [PATH:avv01100]
avv_M00155  Cytochrome c oxidase, prokaryotes [PATH:avv01100]
avv_M00156  Cytochrome c oxidase, cbb3-type [PATH:avv01100]
avv_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:avv01100]
avv_M00169  CAM (Crassulacean acid metabolism), light [PATH:avv01100]
avv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:avv01100]
avv_M00417  Cytochrome o ubiquinol oxidase [PATH:avv01100]
avv_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:avv01100]
avv_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:avv01100]
avv_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:avv01100]
avv_M00555  Betaine biosynthesis, choline => betaine [PATH:avv01100]
avv_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:avv01100]
avv_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:avv01100]
avv_M00621  Glycine cleavage system [PATH:avv01100]
avv_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:avv01100]
avv_M00793  dTDP-L-rhamnose biosynthesis [PATH:avv01100]
avv_M00844  Arginine biosynthesis, ornithine => arginine [PATH:avv01100]
avv_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:avv01100]
avv_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:avv01100]
avv_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:avv01100]
avv_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:avv01100]
avv_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:avv01100]
avv_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:avv01100]
avv_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:avv01100]
avv_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:avv01100]
avv_M00970  Proline degradation, proline => glutamate [PATH:avv01100]
avv_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:avv01100]
Organism
Agrobacterium vitis VAT03-9 [GN:avv]
Related
pathway
avv00010  Glycolysis / Gluconeogenesis
avv00020  Citrate cycle (TCA cycle)
avv00030  Pentose phosphate pathway
avv00040  Pentose and glucuronate interconversions
avv00051  Fructose and mannose metabolism
avv00052  Galactose metabolism
avv00053  Ascorbate and aldarate metabolism
avv00061  Fatty acid biosynthesis
avv00071  Fatty acid degradation
avv00130  Ubiquinone and other terpenoid-quinone biosynthesis
avv00190  Oxidative phosphorylation
avv00220  Arginine biosynthesis
avv00230  Purine metabolism
avv00240  Pyrimidine metabolism
avv00250  Alanine, aspartate and glutamate metabolism
avv00260  Glycine, serine and threonine metabolism
avv00261  Monobactam biosynthesis
avv00270  Cysteine and methionine metabolism
avv00280  Valine, leucine and isoleucine degradation
avv00290  Valine, leucine and isoleucine biosynthesis
avv00300  Lysine biosynthesis
avv00310  Lysine degradation
avv00330  Arginine and proline metabolism
avv00332  Carbapenem biosynthesis
avv00340  Histidine metabolism
avv00350  Tyrosine metabolism
avv00360  Phenylalanine metabolism
avv00361  Chlorocyclohexane and chlorobenzene degradation
avv00362  Benzoate degradation
avv00364  Fluorobenzoate degradation
avv00380  Tryptophan metabolism
avv00400  Phenylalanine, tyrosine and tryptophan biosynthesis
avv00401  Novobiocin biosynthesis
avv00410  beta-Alanine metabolism
avv00430  Taurine and hypotaurine metabolism
avv00440  Phosphonate and phosphinate metabolism
avv00450  Selenocompound metabolism
avv00460  Cyanoamino acid metabolism
avv00470  D-Amino acid metabolism
avv00480  Glutathione metabolism
avv00500  Starch and sucrose metabolism
avv00511  Other glycan degradation
avv00520  Amino sugar and nucleotide sugar metabolism
avv00521  Streptomycin biosynthesis
avv00523  Polyketide sugar unit biosynthesis
avv00525  Acarbose and validamycin biosynthesis
avv00540  Lipopolysaccharide biosynthesis
avv00541  O-Antigen nucleotide sugar biosynthesis
avv00543  Exopolysaccharide biosynthesis
avv00550  Peptidoglycan biosynthesis
avv00552  Teichoic acid biosynthesis
avv00561  Glycerolipid metabolism
avv00562  Inositol phosphate metabolism
avv00564  Glycerophospholipid metabolism
avv00600  Sphingolipid metabolism
avv00620  Pyruvate metabolism
avv00622  Xylene degradation
avv00623  Toluene degradation
avv00625  Chloroalkane and chloroalkene degradation
avv00626  Naphthalene degradation
avv00627  Aminobenzoate degradation
avv00630  Glyoxylate and dicarboxylate metabolism
avv00633  Nitrotoluene degradation
avv00640  Propanoate metabolism
avv00643  Styrene degradation
avv00650  Butanoate metabolism
avv00660  C5-Branched dibasic acid metabolism
avv00670  One carbon pool by folate
avv00680  Methane metabolism
avv00710  Carbon fixation by Calvin cycle
avv00720  Other carbon fixation pathways
avv00730  Thiamine metabolism
avv00740  Riboflavin metabolism
avv00750  Vitamin B6 metabolism
avv00760  Nicotinate and nicotinamide metabolism
avv00770  Pantothenate and CoA biosynthesis
avv00780  Biotin metabolism
avv00785  Lipoic acid metabolism
avv00790  Folate biosynthesis
avv00791  Atrazine degradation
avv00860  Porphyrin metabolism
avv00900  Terpenoid backbone biosynthesis
avv00906  Carotenoid biosynthesis
avv00907  Pinene, camphor and geraniol degradation
avv00910  Nitrogen metabolism
avv00920  Sulfur metabolism
avv00930  Caprolactam degradation
avv00946  Degradation of flavonoids
avv00996  Biosynthesis of various alkaloids
avv00997  Biosynthesis of various other secondary metabolites
avv00999  Biosynthesis of various plant secondary metabolites
avv01040  Biosynthesis of unsaturated fatty acids
avv01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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