KEGG   PATHWAY: gep00010
Entry
gep00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Geothrix sp. PMB-07
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
gep00010  Glycolysis / Gluconeogenesis
gep00010

Module
gep_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gep00010]
gep_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gep00010]
gep_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gep00010]
gep_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gep00010]
Other DBs
GO: 0006096 0006094
Organism
Geothrix sp. PMB-07 [GN:gep]
Gene
Q9293_18475  glucokinase [KO:K00845] [EC:2.7.1.2]
Q9293_00905  ROK family protein [KO:K25026] [EC:2.7.1.2]
Q9293_02890  ROK family protein [KO:K25026] [EC:2.7.1.2]
Q9293_03350  ROK family protein [KO:K25026] [EC:2.7.1.2]
Q9293_09010  ROK family protein [KO:K25026] [EC:2.7.1.2]
Q9293_11985  ROK family protein [KO:K25026] [EC:2.7.1.2]
Q9293_14415  ROK family protein [KO:K25026] [EC:2.7.1.2]
Q9293_14935  ROK family protein [KO:K25026] [EC:2.7.1.2]
Q9293_16280  hypothetical protein [KO:K01810] [EC:5.3.1.9]
Q9293_02155  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Q9293_06510  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Q9293_05720  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
Q9293_09955  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
Q9293_06515  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Q9293_11115  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
Q9293_09850  glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein [KO:K00134] [EC:1.2.1.12]
Q9293_09855  glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein [KO:K00134] [EC:1.2.1.12]
Q9293_18470  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Q9293_11100  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Q9293_13520  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
Q9293_00485  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Q9293_09840  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Q9293_06275  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Q9293_17220  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Q9293_01855  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Q9293_06775  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Q9293_12630  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Q9293_06770  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Q9293_12625  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Q9293_08955  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
Q9293_08840  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
Q9293_04625  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Q9293_17265  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Q9293_14680  aldose epimerase family protein [KO:K01785] [EC:5.1.3.3]
Q9293_10375  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
Q9293_03565  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
gep00020  Citrate cycle (TCA cycle)
gep00030  Pentose phosphate pathway
gep00500  Starch and sucrose metabolism
gep00620  Pyruvate metabolism
gep00640  Propanoate metabolism
gep00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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