KEGG   PATHWAY: lcm01100
Entry
lcm01100                    Pathway                                
Name
Metabolic pathways - Latimeria chalumnae (coelacanth)
Class
Pathway map
lcm01100  Metabolic pathways
lcm01100

Module
lcm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lcm01100]
lcm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lcm01100]
lcm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lcm01100]
lcm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lcm01100]
lcm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lcm01100]
lcm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lcm01100]
lcm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lcm01100]
lcm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lcm01100]
lcm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lcm01100]
lcm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lcm01100]
lcm_M00014  Glucuronate pathway (uronate pathway) [PATH:lcm01100]
lcm_M00015  Proline biosynthesis, glutamate => proline [PATH:lcm01100]
lcm_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lcm01100]
lcm_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:lcm01100]
lcm_M00029  Urea cycle [PATH:lcm01100]
lcm_M00032  Lysine degradation, lysine => saccharopine => acetoacetyl-CoA [PATH:lcm01100]
lcm_M00035  Methionine degradation [PATH:lcm01100]
lcm_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:lcm01100]
lcm_M00037  Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH:lcm01100]
lcm_M00038  Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH:lcm01100]
lcm_M00042  Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH:lcm01100]
lcm_M00043  Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH:lcm01100]
lcm_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:lcm01100]
lcm_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lcm01100]
lcm_M00047  Creatine pathway [PATH:lcm01100]
lcm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lcm01100]
lcm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lcm01100]
lcm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lcm01100]
lcm_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:lcm01100]
lcm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lcm01100]
lcm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lcm01100]
lcm_M00057  Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH:lcm01100]
lcm_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone [PATH:lcm01100]
lcm_M00059  Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH:lcm01100]
lcm_M00065  GPI-anchor biosynthesis, core oligosaccharide [PATH:lcm01100]
lcm_M00066  Lactosylceramide biosynthesis [PATH:lcm01100]
lcm_M00067  Sulfoglycolipids biosynthesis, ceramide/1-alkyl-2-acylglycerol => sulfatide/seminolipid [PATH:lcm01100]
lcm_M00068  Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH:lcm01100]
lcm_M00070  Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH:lcm01100]
lcm_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH:lcm01100]
lcm_M00073  N-glycan precursor trimming [PATH:lcm01100]
lcm_M00075  N-glycan biosynthesis, complex type [PATH:lcm01100]
lcm_M00076  Dermatan sulfate degradation [PATH:lcm01100]
lcm_M00077  Chondroitin sulfate degradation [PATH:lcm01100]
lcm_M00078  Heparan sulfate degradation [PATH:lcm01100]
lcm_M00079  Keratan sulfate degradation [PATH:lcm01100]
lcm_M00083  Fatty acid biosynthesis, elongation [PATH:lcm01100]
lcm_M00085  Fatty acid elongation in mitochondria [PATH:lcm01100]
lcm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lcm01100]
lcm_M00087  beta-Oxidation [PATH:lcm01100]
lcm_M00089  Triacylglycerol biosynthesis [PATH:lcm01100]
lcm_M00090  Phosphatidylcholine (PC) biosynthesis, choline => PC [PATH:lcm01100]
lcm_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:lcm01100]
lcm_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:lcm01100]
lcm_M00094  Ceramide biosynthesis [PATH:lcm01100]
lcm_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:lcm01100]
lcm_M00098  Acylglycerol degradation [PATH:lcm01100]
lcm_M00099  Sphingosine biosynthesis [PATH:lcm01100]
lcm_M00100  Sphingosine degradation [PATH:lcm01100]
lcm_M00101  Cholesterol biosynthesis, FPP => cholesterol [PATH:lcm01100]
lcm_M00103  Cholecalciferol biosynthesis [PATH:lcm01100]
lcm_M00107  Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH:lcm01100]
lcm_M00109  C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH:lcm01100]
lcm_M00110  C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH:lcm01100]
lcm_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:lcm01100]
lcm_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lcm01100]
lcm_M00128  Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:lcm01100]
lcm_M00130  Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH:lcm01100]
lcm_M00131  Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH:lcm01100]
lcm_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:lcm01100]
lcm_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:lcm01100]
lcm_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:lcm01100]
lcm_M00141  C1-unit interconversion, eukaryotes [PATH:lcm01100]
lcm_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:lcm01100]
lcm_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:lcm01100]
lcm_M00146  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [PATH:lcm01100]
lcm_M00147  NADH dehydrogenase (ubiquinone) 1 beta subcomplex [PATH:lcm01100]
lcm_M00148  Succinate dehydrogenase (ubiquinone) [PATH:lcm01100]
lcm_M00151  Cytochrome bc1 complex respiratory unit [PATH:lcm01100]
lcm_M00152  Cytochrome bc1 complex [PATH:lcm01100]
lcm_M00160  V-type ATPase, eukaryotes [PATH:lcm01100]
lcm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lcm01100]
lcm_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:lcm01100]
lcm_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:lcm01100]
lcm_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:lcm01100]
lcm_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lcm01100]
lcm_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:lcm01100]
lcm_M00555  Betaine biosynthesis, choline => betaine [PATH:lcm01100]
lcm_M00621  Glycine cleavage system [PATH:lcm01100]
lcm_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:lcm01100]
lcm_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:lcm01100]
lcm_M00842  Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:lcm01100]
lcm_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lcm01100]
lcm_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:lcm01100]
lcm_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:lcm01100]
lcm_M00861  beta-Oxidation, peroxisome, VLCFA [PATH:lcm01100]
lcm_M00862  beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH:lcm01100]
lcm_M00868  Heme biosynthesis, animals and fungi, glycine => heme [PATH:lcm01100]
lcm_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lcm01100]
lcm_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:lcm01100]
lcm_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:lcm01100]
lcm_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:lcm01100]
lcm_M00912  NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:lcm01100]
lcm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lcm01100]
lcm_M00970  Proline degradation, proline => glutamate [PATH:lcm01100]
lcm_M00972  Proline metabolism [PATH:lcm01100]
lcm_M00974  Betaine metabolism, animals, betaine => glycine [PATH:lcm01100]
lcm_M00976  C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH:lcm01100]
Organism
Latimeria chalumnae (coelacanth) [GN:lcm]
Related
pathway
lcm00010  Glycolysis / Gluconeogenesis
lcm00020  Citrate cycle (TCA cycle)
lcm00030  Pentose phosphate pathway
lcm00040  Pentose and glucuronate interconversions
lcm00051  Fructose and mannose metabolism
lcm00052  Galactose metabolism
lcm00053  Ascorbate and aldarate metabolism
lcm00061  Fatty acid biosynthesis
lcm00062  Fatty acid elongation
lcm00071  Fatty acid degradation
lcm00100  Steroid biosynthesis
lcm00120  Primary bile acid biosynthesis
lcm00130  Ubiquinone and other terpenoid-quinone biosynthesis
lcm00140  Steroid hormone biosynthesis
lcm00190  Oxidative phosphorylation
lcm00220  Arginine biosynthesis
lcm00230  Purine metabolism
lcm00240  Pyrimidine metabolism
lcm00250  Alanine, aspartate and glutamate metabolism
lcm00260  Glycine, serine and threonine metabolism
lcm00270  Cysteine and methionine metabolism
lcm00280  Valine, leucine and isoleucine degradation
lcm00290  Valine, leucine and isoleucine biosynthesis
lcm00310  Lysine degradation
lcm00330  Arginine and proline metabolism
lcm00340  Histidine metabolism
lcm00350  Tyrosine metabolism
lcm00360  Phenylalanine metabolism
lcm00380  Tryptophan metabolism
lcm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lcm00410  beta-Alanine metabolism
lcm00430  Taurine and hypotaurine metabolism
lcm00440  Phosphonate and phosphinate metabolism
lcm00450  Selenocompound metabolism
lcm00470  D-Amino acid metabolism
lcm00480  Glutathione metabolism
lcm00500  Starch and sucrose metabolism
lcm00510  N-Glycan biosynthesis
lcm00511  Other glycan degradation
lcm00512  Mucin type O-glycan biosynthesis
lcm00513  Various types of N-glycan biosynthesis
lcm00514  Other types of O-glycan biosynthesis
lcm00515  Mannose type O-glycan biosynthesis
lcm00520  Amino sugar and nucleotide sugar metabolism
lcm00524  Neomycin, kanamycin and gentamicin biosynthesis
lcm00531  Glycosaminoglycan degradation
lcm00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lcm00533  Glycosaminoglycan biosynthesis - keratan sulfate
lcm00534  Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcm00561  Glycerolipid metabolism
lcm00562  Inositol phosphate metabolism
lcm00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
lcm00564  Glycerophospholipid metabolism
lcm00565  Ether lipid metabolism
lcm00590  Arachidonic acid metabolism
lcm00591  Linoleic acid metabolism
lcm00592  alpha-Linolenic acid metabolism
lcm00600  Sphingolipid metabolism
lcm00601  Glycosphingolipid biosynthesis - lacto and neolacto series
lcm00603  Glycosphingolipid biosynthesis - globo and isoglobo series
lcm00604  Glycosphingolipid biosynthesis - ganglio series
lcm00620  Pyruvate metabolism
lcm00630  Glyoxylate and dicarboxylate metabolism
lcm00640  Propanoate metabolism
lcm00650  Butanoate metabolism
lcm00670  One carbon pool by folate
lcm00730  Thiamine metabolism
lcm00740  Riboflavin metabolism
lcm00750  Vitamin B6 metabolism
lcm00760  Nicotinate and nicotinamide metabolism
lcm00770  Pantothenate and CoA biosynthesis
lcm00780  Biotin metabolism
lcm00785  Lipoic acid metabolism
lcm00790  Folate biosynthesis
lcm00830  Retinol metabolism
lcm00860  Porphyrin metabolism
lcm00900  Terpenoid backbone biosynthesis
lcm00910  Nitrogen metabolism
lcm00920  Sulfur metabolism
lcm00980  Metabolism of xenobiotics by cytochrome P450
lcm00982  Drug metabolism - cytochrome P450
lcm00983  Drug metabolism - other enzymes
lcm01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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