KEGG   PATHWAY: nta00240
Entry
nta00240                    Pathway                                
Name
Pyrimidine metabolism - Nicotiana tabacum (common tobacco)
Class
Metabolism; Nucleotide metabolism
Pathway map
nta00240  Pyrimidine metabolism
nta00240

Module
nta_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:nta00240]
nta_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nta00240]
nta_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nta00240]
nta_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:nta00240]
Other DBs
GO: 0006220 0006213
Organism
Nicotiana tabacum (common tobacco) [GN:nta]
Gene
107823266  carbamoyl-phosphate synthase large chain, chloroplastic-like [KO:K01955] [EC:6.3.5.5]
107785631  CARB; carbamoyl-phosphate synthase large chain, chloroplastic-like [KO:K01955] [EC:6.3.5.5]
107778194  carbamoyl-phosphate synthase small chain, chloroplastic-like [KO:K01956] [EC:6.3.5.5]
107793380  carbamoyl-phosphate synthase small chain, chloroplastic-like [KO:K01956] [EC:6.3.5.5]
107815103  aspartate carbamoyltransferase 1, chloroplastic-like [KO:K00609] [EC:2.1.3.2]
107805660  aspartate carbamoyltransferase 1, chloroplastic-like [KO:K00609] [EC:2.1.3.2]
107804302  dihydroorotase, mitochondrial-like [KO:K01465] [EC:3.5.2.3]
107807663  dihydroorotase, mitochondrial-like [KO:K01465] [EC:3.5.2.3]
107783663  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
107808215  dihydroorotate dehydrogenase (quinone), mitochondrial-like [KO:K00254] [EC:1.3.5.2]
107794649  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
107765924  pyr5-6; uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
107830661  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
107779924  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
107778492  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
107815536  UMP-CMP kinase 3-like [KO:K13800] [EC:2.7.4.14]
107831858  UMP-CMP kinase 3 [KO:K13800] [EC:2.7.4.14]
107812008  probable UMP-CMP kinase 2 [KO:K13800] [EC:2.7.4.14]
107796242  uridylate kinase-like [KO:K09903] [EC:2.7.4.22]
107811021  uridylate kinase-like [KO:K09903] [EC:2.7.4.22]
107768706  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
107790563  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
107768038  NDPK2; nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
107805583  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
107782115  nucleoside diphosphate kinase 4, chloroplastic [KO:K00940] [EC:2.7.4.6]
107771678  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
107776175  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
107817868  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
107829496  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
107825581  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
107762688  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
107814371  nucleoside diphosphate kinase 1-like [KO:K00940] [EC:2.7.4.6]
107816394  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
107771380  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
107815554  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
107786853  apyrase 2-like [KO:K14641] [EC:3.6.1.5]
107817214  apyrase-like [KO:K14641] [EC:3.6.1.5]
107783879  apyrase-like [KO:K14641] [EC:3.6.1.5]
107764352  apyrase-like [KO:K14641] [EC:3.6.1.5]
107771917  APY1; apyrase 2-like [KO:K14641] [EC:3.6.1.5]
107769955  apyrase-like [KO:K14641] [EC:3.6.1.5]
107798219  apyrase 1-like [KO:K14641] [EC:3.6.1.5]
107774476  apyrase 1-like [KO:K14641] [EC:3.6.1.5]
107819665  ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
107800907  ectonucleotide pyrophosphatase/phosphodiesterase family member 3-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
107780279  nudix hydrolase 25-like [KO:K26955] [EC:3.6.1.17]
107814470  nudix hydrolase 25-like [KO:K26955] [EC:3.6.1.17]
107782029  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
107794383  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
107784950  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
107823440  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
107766820  CTP synthase [KO:K01937] [EC:6.3.4.2]
107790774  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
107805414  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
107783332  CTP synthase-like [KO:K01937] [EC:6.3.4.2]
107821621  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
107792772  uridine kinase-like protein 5 [KO:K00876] [EC:2.7.1.48]
107820974  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
107778619  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
107788651  uridine kinase-like protein 4 [KO:K00876] [EC:2.7.1.48]
107780921  uridine kinase-like protein 5 [KO:K00876] [EC:2.7.1.48]
107784213  uridine kinase-like protein 3 [KO:K00876] [EC:2.7.1.48]
107781799  uridine-cytidine kinase C-like [KO:K00876] [EC:2.7.1.48]
107816974  uridine-cytidine kinase C-like [KO:K00876] [EC:2.7.1.48]
107790135  uncharacterized LOC107790135 [KO:K00876] [EC:2.7.1.48]
107812662  uridine-cytidine kinase C-like [KO:K00876] [EC:2.7.1.48]
107806148  uridine-cytidine kinase C-like [KO:K00876] [EC:2.7.1.48]
107792317  C365; uridine-cytidine kinase C-like [KO:K00876] [EC:2.7.1.48]
107786271  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107825669  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107785519  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107822872  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107819473  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107827844  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107800420  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107799132  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
107812569  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
107829326  uridine nucleosidase 1-like [KO:K01240] [EC:3.2.2.3]
107760420  probable uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
107829476  uridine nucleosidase 1-like [KO:K01240] [EC:3.2.2.3]
107821050  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
107817808  uridine kinase-like protein 4 [KO:K00761] [EC:2.4.2.9]
107827713  uracil phosphoribosyltransferase-like [KO:K00761] [EC:2.4.2.9]
107787906  UPRTase; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
107794177  pseudouridine-5'-phosphate glycosidase-like [KO:K16329] [EC:4.2.1.70]
107823838  pseudouridine-5'-phosphate glycosidase-like [KO:K16329] [EC:4.2.1.70]
107825387  cytosolic 5'-nucleotidase 3-like [KO:K24242] [EC:3.1.3.91]
107802662  cytosolic 5'-nucleotidase 3-like [KO:K24242] [EC:3.1.3.91]
107823643  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
107821611  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
107790942  cytidine deaminase 1-like [KO:K01489] [EC:3.5.4.5]
107807190  RNR1b; ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
107770366  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
107829206  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
107803584  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
107807196  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
107781035  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
107792941  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107788382  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107804932  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107766741  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107831666  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107804914  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107765557  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107819551  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
107814067  HD domain-containing protein 2-like [KO:K07023] [EC:3.1.3.89]
107800937  HD domain-containing protein 2 homolog [KO:K07023] [EC:3.1.3.89]
107832532  HD domain-containing protein 2-like [KO:K07023] [EC:3.1.3.89]
107817745  HD domain-containing protein 2-like [KO:K07023] [EC:3.1.3.89]
107762621  HD domain-containing protein YBR242W-like [KO:K07023] [EC:3.1.3.89]
107814907  deoxycytidylate deaminase-like [KO:K01493] [EC:3.5.4.12]
107792164  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
107768472  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
107767328  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
107767530  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
107818071  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
107824504  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
107824833  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
107826005  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
107775275  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
107759974  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
107769449  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
107804836  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
107762488  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
107820953  thymidine kinase a-like [KO:K00857] [EC:2.7.1.21]
107789082  thymidine kinase-like [KO:K00857] [EC:2.7.1.21]
107807865  thymidine kinase a-like [KO:K00857] [EC:2.7.1.21]
107794251  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
107792811  bifunctional dihydrofolate reductase-thymidylate synthase-like [KO:K13998] [EC:1.5.1.3 2.1.1.45]
107809767  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [KO:K00207] [EC:1.3.1.2]
107809801  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [KO:K00207] [EC:1.3.1.2]
107827015  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
107776906  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
107801282  beta-ureidopropionase-like [KO:K01431] [EC:3.5.1.6]
107771508  beta-ureidopropionase-like [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
nta00030  Pentose phosphate pathway
nta00220  Arginine biosynthesis
nta00250  Alanine, aspartate and glutamate metabolism
nta00280  Valine, leucine and isoleucine degradation
nta00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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