PATHWAY: otr01100 Help Entry otr01100                    Pathway                                 Name Metabolic pathways - Oryzomicrobium terrae Class BRITE hierarchy Pathway map otr01100   Metabolic pathways Module otr_M00002   Glycolysis, core module involving three-carbon compounds [PATH:otr01100] otr_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:otr01100] otr_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:otr01100] otr_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:otr01100] otr_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:otr01100] otr_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:otr01100] otr_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:otr01100] otr_M00012   Glyoxylate cycle [PATH:otr01100] otr_M00015   Proline biosynthesis, glutamate => proline [PATH:otr01100] otr_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:otr01100] otr_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:otr01100] otr_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:otr01100] otr_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:otr01100] otr_M00021   Cysteine biosynthesis, serine => cysteine [PATH:otr01100] otr_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:otr01100] otr_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:otr01100] otr_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:otr01100] otr_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:otr01100] otr_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:otr01100] otr_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:otr01100] otr_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:otr01100] otr_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:otr01100] otr_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:otr01100] otr_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:otr01100] otr_M00063   CMP-KDO biosynthesis [PATH:otr01100] otr_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:otr01100] otr_M00082   Fatty acid biosynthesis, initiation [PATH:otr01100] otr_M00083   Fatty acid biosynthesis, elongation [PATH:otr01100] otr_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:otr01100] otr_M00087   beta-Oxidation [PATH:otr01100] otr_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:otr01100] otr_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:otr01100] otr_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:otr01100] otr_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:otr01100] otr_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:otr01100] otr_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:otr01100] otr_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:otr01100] otr_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:otr01100] otr_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:otr01100] otr_M00149   Succinate dehydrogenase, prokaryotes [PATH:otr01100] otr_M00151   Cytochrome bc1 complex respiratory unit [PATH:otr01100] otr_M00155   Cytochrome c oxidase, prokaryotes [PATH:otr01100] otr_M00156   Cytochrome c oxidase, cbb3-type [PATH:otr01100] otr_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:otr01100] otr_M00168   CAM (Crassulacean acid metabolism), dark [PATH:otr01100] otr_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:otr01100] otr_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:otr01100] otr_M00529   Denitrification, nitrate => nitrogen [PATH:otr01100] otr_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:otr01100] otr_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:otr01100] otr_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:otr01100] otr_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:otr01100] otr_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:otr01100] otr_M00793   dTDP-L-rhamnose biosynthesis [PATH:otr01100] otr_M00844   Arginine biosynthesis, ornithine => arginine [PATH:otr01100] otr_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:otr01100] otr_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:otr01100] otr_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:otr01100] otr_M00970   Proline degradation, proline => glutamate [PATH:otr01100] Organism Oryzomicrobium terrae [GN:otr] Related pathway otr00010   Glycolysis / Gluconeogenesis otr00020   Citrate cycle (TCA cycle) otr00030   Pentose phosphate pathway otr00040   Pentose and glucuronate interconversions otr00051   Fructose and mannose metabolism otr00052   Galactose metabolism otr00053   Ascorbate and aldarate metabolism otr00061   Fatty acid biosynthesis otr00071   Fatty acid degradation otr00130   Ubiquinone and other terpenoid-quinone biosynthesis otr00190   Oxidative phosphorylation otr00220   Arginine biosynthesis otr00230   Purine metabolism otr00240   Pyrimidine metabolism otr00250   Alanine, aspartate and glutamate metabolism otr00260   Glycine, serine and threonine metabolism otr00261   Monobactam biosynthesis otr00270   Cysteine and methionine metabolism otr00280   Valine, leucine and isoleucine degradation otr00290   Valine, leucine and isoleucine biosynthesis otr00300   Lysine biosynthesis otr00310   Lysine degradation otr00330   Arginine and proline metabolism otr00332   Carbapenem biosynthesis otr00340   Histidine metabolism otr00350   Tyrosine metabolism otr00360   Phenylalanine metabolism otr00361   Chlorocyclohexane and chlorobenzene degradation otr00362   Benzoate degradation otr00364   Fluorobenzoate degradation otr00380   Tryptophan metabolism otr00400   Phenylalanine, tyrosine and tryptophan biosynthesis otr00401   Novobiocin biosynthesis otr00410   beta-Alanine metabolism otr00430   Taurine and hypotaurine metabolism otr00450   Selenocompound metabolism otr00460   Cyanoamino acid metabolism otr00470   D-Amino acid metabolism otr00480   Glutathione metabolism otr00500   Starch and sucrose metabolism otr00520   Amino sugar and nucleotide sugar metabolism otr00521   Streptomycin biosynthesis otr00523   Polyketide sugar unit biosynthesis otr00525   Acarbose and validamycin biosynthesis otr00540   Lipopolysaccharide biosynthesis otr00541   O-Antigen nucleotide sugar biosynthesis otr00543   Exopolysaccharide biosynthesis otr00550   Peptidoglycan biosynthesis otr00552   Teichoic acid biosynthesis otr00561   Glycerolipid metabolism otr00562   Inositol phosphate metabolism otr00564   Glycerophospholipid metabolism otr00565   Ether lipid metabolism otr00592   alpha-Linolenic acid metabolism otr00620   Pyruvate metabolism otr00621   Dioxin degradation otr00622   Xylene degradation otr00623   Toluene degradation otr00625   Chloroalkane and chloroalkene degradation otr00627   Aminobenzoate degradation otr00630   Glyoxylate and dicarboxylate metabolism otr00633   Nitrotoluene degradation otr00640   Propanoate metabolism otr00643   Styrene degradation otr00650   Butanoate metabolism otr00660   C5-Branched dibasic acid metabolism otr00670   One carbon pool by folate otr00680   Methane metabolism otr00730   Thiamine metabolism otr00740   Riboflavin metabolism otr00750   Vitamin B6 metabolism otr00760   Nicotinate and nicotinamide metabolism otr00770   Pantothenate and CoA biosynthesis otr00780   Biotin metabolism otr00785   Lipoic acid metabolism otr00790   Folate biosynthesis otr00860   Porphyrin metabolism otr00900   Terpenoid backbone biosynthesis otr00906   Carotenoid biosynthesis otr00907   Pinene, camphor and geraniol degradation otr00910   Nitrogen metabolism otr00920   Sulfur metabolism otr00930   Caprolactam degradation otr00999   Biosynthesis of various plant secondary metabolites otr01040   Biosynthesis of unsaturated fatty acids otr01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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