KEGG   PATHWAY: scia00010
Entry
scia00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Salicibibacter cibarius
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
scia00010  Glycolysis / Gluconeogenesis
scia00010

Module
scia_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:scia00010]
scia_M00002  Glycolysis, core module involving three-carbon compounds [PATH:scia00010]
scia_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scia00010]
scia_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scia00010]
Other DBs
GO: 0006096 0006094
Organism
Salicibibacter cibarius [GN:scia]
Gene
HUG15_18345  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
HUG15_19020  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HUG15_18055  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
HUG15_19300  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
HUG15_22070  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
HUG15_13555  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
HUG15_21255  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
HUG15_21265  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HUG15_17875  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
HUG15_21260  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HUG15_06880  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
HUG15_21250  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
HUG15_21245  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
HUG15_18050  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HUG15_13935  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
HUG15_15270  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
HUG15_20760  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
HUG15_13930  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
HUG15_15265  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
HUG15_20755  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
HUG15_13925  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
HUG15_15260  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
HUG15_20765  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
HUG15_15255  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HUG15_20750  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HUG15_10455  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HUG15_02700  Zn-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HUG15_15835  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HUG15_20530  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HUG15_09470  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HUG15_02725  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
HUG15_13115  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HUG15_14130  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HUG15_18350  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUG15_19600  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUG15_04835  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUG15_20870  CoA-binding protein [KO:K01905] [EC:6.2.1.13]
HUG15_13190  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
HUG15_14070  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
HUG15_08520  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
HUG15_18805  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
HUG15_03415  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
scia00020  Citrate cycle (TCA cycle)
scia00030  Pentose phosphate pathway
scia00500  Starch and sucrose metabolism
scia00620  Pyruvate metabolism
scia00640  Propanoate metabolism
scia00710  Carbon fixation in photosynthetic organisms
KO pathway
ko00010   
LinkDB

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