KEGG   PATHWAY: sry01100
Entry
sry01100                    Pathway                                
Name
Metabolic pathways - Serratia plymuthica S13
Class
Pathway map
sry01100  Metabolic pathways
sry01100

Module
sry_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sry01100]
sry_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sry01100]
sry_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sry01100]
sry_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sry01100]
sry_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sry01100]
sry_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sry01100]
sry_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sry01100]
sry_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sry01100]
sry_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sry01100]
sry_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sry01100]
sry_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sry01100]
sry_M00012  Glyoxylate cycle [PATH:sry01100]
sry_M00015  Proline biosynthesis, glutamate => proline [PATH:sry01100]
sry_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sry01100]
sry_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sry01100]
sry_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sry01100]
sry_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sry01100]
sry_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sry01100]
sry_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sry01100]
sry_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sry01100]
sry_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sry01100]
sry_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sry01100]
sry_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sry01100]
sry_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sry01100]
sry_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sry01100]
sry_M00034  Methionine salvage pathway [PATH:sry01100]
sry_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sry01100]
sry_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sry01100]
sry_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sry01100]
sry_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sry01100]
sry_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sry01100]
sry_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sry01100]
sry_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sry01100]
sry_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sry01100]
sry_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sry01100]
sry_M00063  CMP-KDO biosynthesis [PATH:sry01100]
sry_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sry01100]
sry_M00082  Fatty acid biosynthesis, initiation [PATH:sry01100]
sry_M00083  Fatty acid biosynthesis, elongation [PATH:sry01100]
sry_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sry01100]
sry_M00087  beta-Oxidation [PATH:sry01100]
sry_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sry01100]
sry_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sry01100]
sry_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sry01100]
sry_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sry01100]
sry_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sry01100]
sry_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sry01100]
sry_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sry01100]
sry_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sry01100]
sry_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sry01100]
sry_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sry01100]
sry_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sry01100]
sry_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sry01100]
sry_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sry01100]
sry_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sry01100]
sry_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sry01100]
sry_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:sry01100]
sry_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:sry01100]
sry_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sry01100]
sry_M00149  Succinate dehydrogenase, prokaryotes [PATH:sry01100]
sry_M00150  Fumarate reductase, prokaryotes [PATH:sry01100]
sry_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sry01100]
sry_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sry01100]
sry_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sry01100]
sry_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sry01100]
sry_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:sry01100]
sry_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sry01100]
sry_M00417  Cytochrome o ubiquinol oxidase [PATH:sry01100]
sry_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sry01100]
sry_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sry01100]
sry_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sry01100]
sry_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sry01100]
sry_M00555  Betaine biosynthesis, choline => betaine [PATH:sry01100]
sry_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sry01100]
sry_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sry01100]
sry_M00621  Glycine cleavage system [PATH:sry01100]
sry_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:sry01100]
sry_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sry01100]
sry_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sry01100]
sry_M00790  Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:sry01100]
sry_M00793  dTDP-L-rhamnose biosynthesis [PATH:sry01100]
sry_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sry01100]
sry_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sry01100]
sry_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sry01100]
sry_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:sry01100]
sry_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:sry01100]
sry_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sry01100]
sry_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sry01100]
sry_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sry01100]
sry_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sry01100]
sry_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:sry01100]
sry_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sry01100]
sry_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:sry01100]
sry_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:sry01100]
sry_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:sry01100]
sry_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:sry01100]
sry_M00970  Proline degradation, proline => glutamate [PATH:sry01100]
Organism
Serratia plymuthica S13 [GN:sry]
Related
pathway
sry00010  Glycolysis / Gluconeogenesis
sry00020  Citrate cycle (TCA cycle)
sry00030  Pentose phosphate pathway
sry00040  Pentose and glucuronate interconversions
sry00051  Fructose and mannose metabolism
sry00052  Galactose metabolism
sry00053  Ascorbate and aldarate metabolism
sry00061  Fatty acid biosynthesis
sry00071  Fatty acid degradation
sry00130  Ubiquinone and other terpenoid-quinone biosynthesis
sry00190  Oxidative phosphorylation
sry00220  Arginine biosynthesis
sry00230  Purine metabolism
sry00240  Pyrimidine metabolism
sry00250  Alanine, aspartate and glutamate metabolism
sry00260  Glycine, serine and threonine metabolism
sry00261  Monobactam biosynthesis
sry00270  Cysteine and methionine metabolism
sry00280  Valine, leucine and isoleucine degradation
sry00290  Valine, leucine and isoleucine biosynthesis
sry00300  Lysine biosynthesis
sry00310  Lysine degradation
sry00330  Arginine and proline metabolism
sry00332  Carbapenem biosynthesis
sry00340  Histidine metabolism
sry00350  Tyrosine metabolism
sry00360  Phenylalanine metabolism
sry00361  Chlorocyclohexane and chlorobenzene degradation
sry00362  Benzoate degradation
sry00364  Fluorobenzoate degradation
sry00380  Tryptophan metabolism
sry00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sry00401  Novobiocin biosynthesis
sry00404  Staurosporine biosynthesis
sry00410  beta-Alanine metabolism
sry00430  Taurine and hypotaurine metabolism
sry00440  Phosphonate and phosphinate metabolism
sry00450  Selenocompound metabolism
sry00460  Cyanoamino acid metabolism
sry00470  D-Amino acid metabolism
sry00480  Glutathione metabolism
sry00500  Starch and sucrose metabolism
sry00511  Other glycan degradation
sry00520  Amino sugar and nucleotide sugar metabolism
sry00521  Streptomycin biosynthesis
sry00523  Polyketide sugar unit biosynthesis
sry00525  Acarbose and validamycin biosynthesis
sry00540  Lipopolysaccharide biosynthesis
sry00541  O-Antigen nucleotide sugar biosynthesis
sry00542  O-Antigen repeat unit biosynthesis
sry00543  Exopolysaccharide biosynthesis
sry00550  Peptidoglycan biosynthesis
sry00552  Teichoic acid biosynthesis
sry00561  Glycerolipid metabolism
sry00562  Inositol phosphate metabolism
sry00564  Glycerophospholipid metabolism
sry00565  Ether lipid metabolism
sry00591  Linoleic acid metabolism
sry00592  alpha-Linolenic acid metabolism
sry00600  Sphingolipid metabolism
sry00620  Pyruvate metabolism
sry00623  Toluene degradation
sry00625  Chloroalkane and chloroalkene degradation
sry00626  Naphthalene degradation
sry00627  Aminobenzoate degradation
sry00630  Glyoxylate and dicarboxylate metabolism
sry00633  Nitrotoluene degradation
sry00640  Propanoate metabolism
sry00643  Styrene degradation
sry00650  Butanoate metabolism
sry00660  C5-Branched dibasic acid metabolism
sry00670  One carbon pool by folate
sry00680  Methane metabolism
sry00730  Thiamine metabolism
sry00740  Riboflavin metabolism
sry00750  Vitamin B6 metabolism
sry00760  Nicotinate and nicotinamide metabolism
sry00770  Pantothenate and CoA biosynthesis
sry00780  Biotin metabolism
sry00785  Lipoic acid metabolism
sry00790  Folate biosynthesis
sry00791  Atrazine degradation
sry00860  Porphyrin metabolism
sry00900  Terpenoid backbone biosynthesis
sry00903  Limonene degradation
sry00907  Pinene, camphor and geraniol degradation
sry00910  Nitrogen metabolism
sry00920  Sulfur metabolism
sry00930  Caprolactam degradation
sry00997  Biosynthesis of various other secondary metabolites
sry00998  Biosynthesis of various antibiotics
sry00999  Biosynthesis of various plant secondary metabolites
sry01040  Biosynthesis of unsaturated fatty acids
sry01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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