PATHWAY: vcra01100 Help Entry vcra01100                   Pathway                                 Name Metabolic pathways - Vibrio crassostreae Class BRITE hierarchy Pathway map vcra01100   Metabolic pathways Module vcra_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vcra01100] vcra_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vcra01100] vcra_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vcra01100] vcra_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vcra01100] vcra_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vcra01100] vcra_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vcra01100] vcra_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vcra01100] vcra_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vcra01100] vcra_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vcra01100] vcra_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vcra01100] vcra_M00012   Glyoxylate cycle [PATH:vcra01100] vcra_M00015   Proline biosynthesis, glutamate => proline [PATH:vcra01100] vcra_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vcra01100] vcra_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vcra01100] vcra_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vcra01100] vcra_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vcra01100] vcra_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:vcra01100] vcra_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vcra01100] vcra_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vcra01100] vcra_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vcra01100] vcra_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vcra01100] vcra_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vcra01100] vcra_M00026   Histidine biosynthesis, PRPP => histidine [PATH:vcra01100] vcra_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:vcra01100] vcra_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:vcra01100] vcra_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vcra01100] vcra_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vcra01100] vcra_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vcra01100] vcra_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vcra01100] vcra_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vcra01100] vcra_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vcra01100] vcra_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vcra01100] vcra_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vcra01100] vcra_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:vcra01100] vcra_M00063   CMP-KDO biosynthesis [PATH:vcra01100] vcra_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vcra01100] vcra_M00082   Fatty acid biosynthesis, initiation [PATH:vcra01100] vcra_M00083   Fatty acid biosynthesis, elongation [PATH:vcra01100] vcra_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vcra01100] vcra_M00087   beta-Oxidation [PATH:vcra01100] vcra_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vcra01100] vcra_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vcra01100] vcra_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vcra01100] vcra_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vcra01100] vcra_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:vcra01100] vcra_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:vcra01100] vcra_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vcra01100] vcra_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vcra01100] vcra_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vcra01100] vcra_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vcra01100] vcra_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vcra01100] vcra_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:vcra01100] vcra_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vcra01100] vcra_M00140   C1-unit interconversion, prokaryotes [PATH:vcra01100] vcra_M00149   Succinate dehydrogenase, prokaryotes [PATH:vcra01100] vcra_M00150   Fumarate reductase, prokaryotes [PATH:vcra01100] vcra_M00151   Cytochrome bc1 complex respiratory unit [PATH:vcra01100] vcra_M00155   Cytochrome c oxidase, prokaryotes [PATH:vcra01100] vcra_M00156   Cytochrome c oxidase, cbb3-type [PATH:vcra01100] vcra_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:vcra01100] vcra_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vcra01100] vcra_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:vcra01100] vcra_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vcra01100] vcra_M00417   Cytochrome o ubiquinol oxidase [PATH:vcra01100] vcra_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vcra01100] vcra_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vcra01100] vcra_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vcra01100] vcra_M00555   Betaine biosynthesis, choline => betaine [PATH:vcra01100] vcra_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vcra01100] vcra_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vcra01100] vcra_M00621   Glycine cleavage system [PATH:vcra01100] vcra_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vcra01100] vcra_M00793   dTDP-L-rhamnose biosynthesis [PATH:vcra01100] vcra_M00844   Arginine biosynthesis, ornithine => arginine [PATH:vcra01100] vcra_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vcra01100] vcra_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:vcra01100] vcra_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vcra01100] vcra_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vcra01100] vcra_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:vcra01100] vcra_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:vcra01100] vcra_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:vcra01100] vcra_M00970   Proline degradation, proline => glutamate [PATH:vcra01100] Organism Vibrio crassostreae [GN:vcra] Related pathway vcra00010   Glycolysis / Gluconeogenesis vcra00020   Citrate cycle (TCA cycle) vcra00030   Pentose phosphate pathway vcra00040   Pentose and glucuronate interconversions vcra00051   Fructose and mannose metabolism vcra00052   Galactose metabolism vcra00053   Ascorbate and aldarate metabolism vcra00061   Fatty acid biosynthesis vcra00071   Fatty acid degradation vcra00130   Ubiquinone and other terpenoid-quinone biosynthesis vcra00190   Oxidative phosphorylation vcra00220   Arginine biosynthesis vcra00230   Purine metabolism vcra00240   Pyrimidine metabolism vcra00250   Alanine, aspartate and glutamate metabolism vcra00260   Glycine, serine and threonine metabolism vcra00261   Monobactam biosynthesis vcra00270   Cysteine and methionine metabolism vcra00280   Valine, leucine and isoleucine degradation vcra00290   Valine, leucine and isoleucine biosynthesis vcra00300   Lysine biosynthesis vcra00310   Lysine degradation vcra00330   Arginine and proline metabolism vcra00332   Carbapenem biosynthesis vcra00340   Histidine metabolism vcra00350   Tyrosine metabolism vcra00360   Phenylalanine metabolism vcra00362   Benzoate degradation vcra00380   Tryptophan metabolism vcra00400   Phenylalanine, tyrosine and tryptophan biosynthesis vcra00401   Novobiocin biosynthesis vcra00410   beta-Alanine metabolism vcra00430   Taurine and hypotaurine metabolism vcra00440   Phosphonate and phosphinate metabolism vcra00450   Selenocompound metabolism vcra00460   Cyanoamino acid metabolism vcra00470   D-Amino acid metabolism vcra00480   Glutathione metabolism vcra00500   Starch and sucrose metabolism vcra00511   Other glycan degradation vcra00520   Amino sugar and nucleotide sugar metabolism vcra00521   Streptomycin biosynthesis vcra00523   Polyketide sugar unit biosynthesis vcra00525   Acarbose and validamycin biosynthesis vcra00540   Lipopolysaccharide biosynthesis vcra00541   O-Antigen nucleotide sugar biosynthesis vcra00543   Exopolysaccharide biosynthesis vcra00550   Peptidoglycan biosynthesis vcra00552   Teichoic acid biosynthesis vcra00561   Glycerolipid metabolism vcra00562   Inositol phosphate metabolism vcra00564   Glycerophospholipid metabolism vcra00565   Ether lipid metabolism vcra00592   alpha-Linolenic acid metabolism vcra00600   Sphingolipid metabolism vcra00620   Pyruvate metabolism vcra00625   Chloroalkane and chloroalkene degradation vcra00626   Naphthalene degradation vcra00627   Aminobenzoate degradation vcra00630   Glyoxylate and dicarboxylate metabolism vcra00633   Nitrotoluene degradation vcra00640   Propanoate metabolism vcra00643   Styrene degradation vcra00650   Butanoate metabolism vcra00660   C5-Branched dibasic acid metabolism vcra00670   One carbon pool by folate vcra00680   Methane metabolism vcra00730   Thiamine metabolism vcra00740   Riboflavin metabolism vcra00750   Vitamin B6 metabolism vcra00760   Nicotinate and nicotinamide metabolism vcra00770   Pantothenate and CoA biosynthesis vcra00780   Biotin metabolism vcra00785   Lipoic acid metabolism vcra00790   Folate biosynthesis vcra00860   Porphyrin metabolism vcra00900   Terpenoid backbone biosynthesis vcra00907   Pinene, camphor and geraniol degradation vcra00910   Nitrogen metabolism vcra00920   Sulfur metabolism vcra00930   Caprolactam degradation vcra00946   Degradation of flavonoids vcra00999   Biosynthesis of various plant secondary metabolites vcra01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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