KEGG   PATHWAY: vfv00010
Entry
vfv00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Vagococcus fluvialis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vfv00010  Glycolysis / Gluconeogenesis
vfv00010

Module
vfv_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vfv00010]
vfv_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vfv00010]
vfv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vfv00010]
Other DBs
GO: 0006096 0006094
Organism
Vagococcus fluvialis [GN:vfv]
Gene
K5K99_10965  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
K5K99_09035  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
K5K99_09995  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
K5K99_14170  fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
K5K99_07715  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
K5K99_11830  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
K5K99_04140  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
K5K99_12450  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
K5K99_12460  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
K5K99_12455  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
K5K99_02230  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
K5K99_08625  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
K5K99_12445  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
K5K99_12440  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
K5K99_09990  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
K5K99_11730  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
K5K99_07365  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
K5K99_09840  thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
K5K99_07370  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
K5K99_09835  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
K5K99_06390  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
K5K99_07375  dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
K5K99_09830  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
K5K99_12505  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
K5K99_06395  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K5K99_07380  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K5K99_09850  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K5K99_11295  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K5K99_12520  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K5K99_07230  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
K5K99_12320  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
K5K99_02420  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
K5K99_03130  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
K5K99_00690  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
K5K99_11835  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K5K99_11060  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K5K99_03900  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
K5K99_06760  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
K5K99_08455  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
K5K99_06900  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
K5K99_00980  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
K5K99_01055  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
K5K99_01530  family 1 glycosylhydrolase [KO:K01223] [EC:3.2.1.86]
K5K99_01930  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
K5K99_04330  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
K5K99_04465  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
K5K99_05965  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
K5K99_05985  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
K5K99_10540  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
K5K99_12635  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
K5K99_12895  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vfv00020  Citrate cycle (TCA cycle)
vfv00030  Pentose phosphate pathway
vfv00500  Starch and sucrose metabolism
vfv00620  Pyruvate metabolism
vfv00640  Propanoate metabolism
vfv00710  Carbon fixation in photosynthetic organisms
KO pathway
ko00010   
LinkDB

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