KEGG   PATHWAY: xgr01100
Entry
xgr01100                    Pathway                                
Name
Metabolic pathways - Xenorhabdus griffiniae
Class
Pathway map
xgr01100  Metabolic pathways
xgr01100

Module
xgr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xgr01100]
xgr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xgr01100]
xgr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:xgr01100]
xgr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xgr01100]
xgr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xgr01100]
xgr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xgr01100]
xgr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xgr01100]
xgr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:xgr01100]
xgr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xgr01100]
xgr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xgr01100]
xgr_M00012  Glyoxylate cycle [PATH:xgr01100]
xgr_M00015  Proline biosynthesis, glutamate => proline [PATH:xgr01100]
xgr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xgr01100]
xgr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:xgr01100]
xgr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:xgr01100]
xgr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xgr01100]
xgr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:xgr01100]
xgr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xgr01100]
xgr_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xgr01100]
xgr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:xgr01100]
xgr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:xgr01100]
xgr_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xgr01100]
xgr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xgr01100]
xgr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xgr01100]
xgr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xgr01100]
xgr_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:xgr01100]
xgr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xgr01100]
xgr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xgr01100]
xgr_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:xgr01100]
xgr_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xgr01100]
xgr_M00063  CMP-KDO biosynthesis [PATH:xgr01100]
xgr_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:xgr01100]
xgr_M00082  Fatty acid biosynthesis, initiation [PATH:xgr01100]
xgr_M00083  Fatty acid biosynthesis, elongation [PATH:xgr01100]
xgr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:xgr01100]
xgr_M00087  beta-Oxidation [PATH:xgr01100]
xgr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xgr01100]
xgr_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:xgr01100]
xgr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:xgr01100]
xgr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:xgr01100]
xgr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xgr01100]
xgr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xgr01100]
xgr_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:xgr01100]
xgr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xgr01100]
xgr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:xgr01100]
xgr_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:xgr01100]
xgr_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:xgr01100]
xgr_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:xgr01100]
xgr_M00149  Succinate dehydrogenase, prokaryotes [PATH:xgr01100]
xgr_M00150  Fumarate reductase, prokaryotes [PATH:xgr01100]
xgr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:xgr01100]
xgr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:xgr01100]
xgr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:xgr01100]
xgr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xgr01100]
xgr_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xgr01100]
xgr_M00417  Cytochrome o ubiquinol oxidase [PATH:xgr01100]
xgr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xgr01100]
xgr_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:xgr01100]
xgr_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xgr01100]
xgr_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xgr01100]
xgr_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:xgr01100]
xgr_M00555  Betaine biosynthesis, choline => betaine [PATH:xgr01100]
xgr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xgr01100]
xgr_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:xgr01100]
xgr_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:xgr01100]
xgr_M00621  Glycine cleavage system [PATH:xgr01100]
xgr_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:xgr01100]
xgr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:xgr01100]
xgr_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xgr01100]
xgr_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:xgr01100]
xgr_M00878  Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:xgr01100]
xgr_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:xgr01100]
xgr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xgr01100]
xgr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xgr01100]
xgr_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xgr01100]
xgr_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:xgr01100]
xgr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xgr01100]
xgr_M00970  Proline degradation, proline => glutamate [PATH:xgr01100]
Organism
Xenorhabdus griffiniae [GN:xgr]
Related
pathway
xgr00010  Glycolysis / Gluconeogenesis
xgr00020  Citrate cycle (TCA cycle)
xgr00030  Pentose phosphate pathway
xgr00040  Pentose and glucuronate interconversions
xgr00051  Fructose and mannose metabolism
xgr00052  Galactose metabolism
xgr00053  Ascorbate and aldarate metabolism
xgr00061  Fatty acid biosynthesis
xgr00071  Fatty acid degradation
xgr00130  Ubiquinone and other terpenoid-quinone biosynthesis
xgr00190  Oxidative phosphorylation
xgr00220  Arginine biosynthesis
xgr00230  Purine metabolism
xgr00240  Pyrimidine metabolism
xgr00250  Alanine, aspartate and glutamate metabolism
xgr00260  Glycine, serine and threonine metabolism
xgr00261  Monobactam biosynthesis
xgr00270  Cysteine and methionine metabolism
xgr00280  Valine, leucine and isoleucine degradation
xgr00290  Valine, leucine and isoleucine biosynthesis
xgr00300  Lysine biosynthesis
xgr00310  Lysine degradation
xgr00330  Arginine and proline metabolism
xgr00332  Carbapenem biosynthesis
xgr00340  Histidine metabolism
xgr00350  Tyrosine metabolism
xgr00360  Phenylalanine metabolism
xgr00362  Benzoate degradation
xgr00380  Tryptophan metabolism
xgr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
xgr00401  Novobiocin biosynthesis
xgr00410  beta-Alanine metabolism
xgr00430  Taurine and hypotaurine metabolism
xgr00450  Selenocompound metabolism
xgr00460  Cyanoamino acid metabolism
xgr00470  D-Amino acid metabolism
xgr00480  Glutathione metabolism
xgr00500  Starch and sucrose metabolism
xgr00511  Other glycan degradation
xgr00520  Amino sugar and nucleotide sugar metabolism
xgr00521  Streptomycin biosynthesis
xgr00523  Polyketide sugar unit biosynthesis
xgr00525  Acarbose and validamycin biosynthesis
xgr00540  Lipopolysaccharide biosynthesis
xgr00541  O-Antigen nucleotide sugar biosynthesis
xgr00542  O-Antigen repeat unit biosynthesis
xgr00543  Exopolysaccharide biosynthesis
xgr00550  Peptidoglycan biosynthesis
xgr00552  Teichoic acid biosynthesis
xgr00561  Glycerolipid metabolism
xgr00562  Inositol phosphate metabolism
xgr00564  Glycerophospholipid metabolism
xgr00592  alpha-Linolenic acid metabolism
xgr00600  Sphingolipid metabolism
xgr00620  Pyruvate metabolism
xgr00621  Dioxin degradation
xgr00625  Chloroalkane and chloroalkene degradation
xgr00626  Naphthalene degradation
xgr00627  Aminobenzoate degradation
xgr00630  Glyoxylate and dicarboxylate metabolism
xgr00633  Nitrotoluene degradation
xgr00640  Propanoate metabolism
xgr00643  Styrene degradation
xgr00650  Butanoate metabolism
xgr00660  C5-Branched dibasic acid metabolism
xgr00670  One carbon pool by folate
xgr00680  Methane metabolism
xgr00730  Thiamine metabolism
xgr00740  Riboflavin metabolism
xgr00750  Vitamin B6 metabolism
xgr00760  Nicotinate and nicotinamide metabolism
xgr00770  Pantothenate and CoA biosynthesis
xgr00780  Biotin metabolism
xgr00785  Lipoic acid metabolism
xgr00790  Folate biosynthesis
xgr00860  Porphyrin metabolism
xgr00900  Terpenoid backbone biosynthesis
xgr00907  Pinene, camphor and geraniol degradation
xgr00910  Nitrogen metabolism
xgr00920  Sulfur metabolism
xgr00930  Caprolactam degradation
xgr00997  Biosynthesis of various other secondary metabolites
xgr00998  Biosynthesis of various antibiotics
xgr00999  Biosynthesis of various plant secondary metabolites
xgr01040  Biosynthesis of unsaturated fatty acids
xgr01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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