Pectobacterium atrosepticum 21A: GZ59_05880
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Entry
GZ59_05880 CDS
T03293
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00020
Citrate cycle (TCA cycle)
pato00270
Cysteine and methionine metabolism
pato00620
Pyruvate metabolism
pato00630
Glyoxylate and dicarboxylate metabolism
pato00680
Methane metabolism
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01120
Microbial metabolism in diverse environments
pato01200
Carbon metabolism
Module
pato_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pato_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pato_M00012
Glyoxylate cycle
pato_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GZ59_05880 (mdh)
00620 Pyruvate metabolism
GZ59_05880 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
GZ59_05880 (mdh)
09102 Energy metabolism
00680 Methane metabolism
GZ59_05880 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GZ59_05880 (mdh)
Enzymes [BR:
pato01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
GZ59_05880 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
GFP
Motif
Other DBs
NCBI-ProteinID:
AIK12473
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All DBs
Position
639559..640494
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AA seq
311 aa
AA seq
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MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGYSG
EDAKPALAGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIAITCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPQDINVPVIGGHSGV
TILPLLSQVSGISFSEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGENGVVECAYVESDGKHARFFAQPILLGKDGVAERKDIGTLSAFEQNALSSMLDTLK
QDIELGETFIK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcagttctcggagcagcaggtggtatcggtcaggcactcgcactcctcctc
aaaacccagcttccttcaggttcagaactatccctctacgatatcgctccggtaacgccg
ggtgttgccgtcgatctgagccatattcctacagcagtgaagatcaaaggctatagcggt
gaagatgctaaaccggcgcttgctggtgcggatatcgtgctgatttctgccggtgtggca
cgtaaacctggcatggatcgttccgatctgttcaacgtcaatgctggcattgtacgtaac
ctggttgagcaaatcgcgattacctgcccgaaagcctgtatcggtataatcaccaaccca
gtgaacacgaccgttgccatcgcagcagaagtgctgaaaaaagcaggcgtgtatgacaaa
aacaaactgttcggtgtaactacgctggatatcatccgttccaacacgtttgttgctgaa
ttgaaaggcaagcagccgcaggatattaacgtgccggttatcggcgggcactctggcgtg
acaattctgcctctgctgtctcaggtttcaggcatcagcttcagcgagcaggaagtggcc
gatctgaccaaacgtatccagaatgcgggcaccgaggttgttgaagccaaagcaggtggc
ggatcggcaacgctgtctatgggtcaagccgctgcgcgttttggtctgtctctggtccgc
gcgctgcaaggcgaaaacggtgtggtggaatgtgcatacgttgaaagtgacggcaaacat
gcgcgcttctttgctcaaccaattctgttaggtaaagatggcgtcgctgagcgtaaagac
atcggcacattaagtgcttttgagcaaaacgcgcttagcagcatgctggatacgctgaag
caggatattgagttaggcgagacgttcatcaagtaa
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