Prunus avium (sweet cherry): 110749525
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Entry
110749525 CDS
T05161
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03020
RNA polymerase
pavi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110749525
09124 Replication and repair
03420 Nucleotide excision repair
110749525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110749525
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110749525
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110749525
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110749525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
110749525
NCBI-ProteinID:
XP_021805326
UniProt:
A0A6P5RW39
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MEGKSYQRVPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS
VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV
TSKDLLSSDHTVVPVDFSDSAGMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPDIRINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVVVVDPEAYTYD
DEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEVLKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaatcgtaccagagggtaccgcgggtcaaaatccgtgaaatgcgtgacgac
tacatgaagttcgagctccgcgacaccgacgccagcgtcgccaacgcgctccggcgagtg
atgatcgccgaggtccccaccgtcgccatcgaccttgtcgagatcgagatcaactcgtcc
gtgcttaacgacgagttcatagcccacagactcggactcatcccattgacctccgaccga
gccatgagcatgcgcttctcacgtgactgcgacgcctgcgacggcgacggccagtgcgag
ttctgctccgtcgagtttcatcttcgcgccaagtgccattccgaccaaaccctagacgtc
actagcaaggaccttctcagctctgaccacaccgtcgtccccgtcgatttctccgattcc
gccggcatggaatcctctgaacaaaaagggattatcattgtgaagttgcgaagggggcaa
gagctgaggctaagggccattgccagaaaggggattggcaaagatcatgccaagtggtca
cctgcagccactgtcactttcatgtatgaacccgatattcgaatcaatgaggagttgatg
gatatgttgactcttgatgagaagaaggcttgggttgaaagtagtcctaccaaagtcttt
gactttgatcctaaaaccgagaaggtcgtggtggttgatcctgaagcatacacctatgat
gatgaagtgatcaagaaagcggaagctatggggaaacctgggcttgtggatatcattgca
aaagaagatagttttattttcacagtggaatctactggtgcggtcaaagcttctcagttg
ttactcaatgccatcgaagtcctgaaacagaaactggatgcagtgcgcctttctgaggat
actgtagaagctgatgatcagtttggtgaattaggtgctcatatgcgaggaggatga
DBGET
integrated database retrieval system