Prunus avium (sweet cherry): 110751190
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Entry
110751190 CDS
T05161
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
pavi03410
Base excision repair
pavi03420
Nucleotide excision repair
pavi03430
Mismatch repair
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110751190
03410 Base excision repair
110751190
03420 Nucleotide excision repair
110751190
03430 Mismatch repair
110751190
03440 Homologous recombination
110751190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavi03032
]
110751190
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110751190
Enzymes [BR:
pavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110751190
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
110751190
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
110751190
MMR (mismatch excision repair)
DNA polymerase delta complex
110751190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
110751190
NCBI-ProteinID:
XP_021807316
UniProt:
A0A6P5S1M3
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MKKGISRKRPALTQQPSPANPPKQHATSQEDEFLDEDVFLDETLFETEDDLILRDIEERQ
ALASRLTKWARPSISHAYISASRSIAFQQLEIDYVIGESHRELLPNWSGSAAIIRIFGVT
KEGHSVCCHVHGFEPYFYISCPPGMGPDDISRFHQILEGRMGEMNRNSKVPKFIRHIEMV
QKRSIMYYQQQDSHPFLKIVVALPTMVASCRGILDRGIQIDGLGMKSFMTYESNVLFALR
FMIDCNIVGGNWIEVPAGKYKTAKHSSYCQLEFDCLYSDLISHAPEGEFSKMAPFRILSF
DIECAGRKGHFPEPTHDPVIQIANLVTLQGENEPFIRNVMTLKSCSPIVGVDVISFDTER
EVLLAWRDLIREVDPDVIIGYNICKFDLPYLIERAETLGIAEFPILGRIKNSRVRVKDTT
FSSRQYGTRESKEVTVEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIIS
DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKV
LSQLLRKAKQKNLLIPNVKQAGSEQGKYEGATVLEAKAGFFEKPIATLDFASLYPSIMMA
YNLCYCTLVTTEDAHKLNIPPEFVNKTPSGETFVKSNLQKGILPEILEELLAARKRAKAD
LKEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCIEISSSVTSYGRQMIEHTKN
LVKEKFTTLKGYEHNAEVIYGDTDSVMVQFGVSTVEAAMNLGREAAEYISGTFIKPIKLE
FEKVYYPYLLISKKRYAGLLWTSPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKLLID
RDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAAT
APNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQISKPLLRIFEPIL
KNASKELLHGSHTRSISISTPSNSGIMKFAKKQLTCVGCKALISNADRTLCSHCKGREAE
LYCKTVAHVSELETLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKVQ
LDRWSF
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggcataagcagaaaacggccagcgctaacacaacagccgtcacctgcgaac
ccacccaagcagcacgccacgtcccaagaagatgaatttctggacgaggacgtcttcctc
gacgaaaccctcttcgagactgaagacgacctcattcttcgcgacattgaggagcgccag
gcccttgcttcccgcctcaccaaatgggcccgcccgtctatctcccatgcctacatttcc
gcctcccgaagcatcgcttttcagcaattggagattgattatgttattggagagagccat
agagaattgttgcctaattggtccgggtctgctgcaattatccgaatttttggggttaca
aaggaaggacatagtgtttgctgccatgttcatggatttgagccatatttctatatcagc
tgtcctccgggaatgggccctgatgatatttccaggtttcatcaaattcttgaggggaga
atgggggagatgaatcggaacagtaaggtaccaaaattcattcgccatattgaaatggtg
cagaagaggagtatcatgtattaccagcagcaggattctcatcccttcctcaaaattgtt
gttgctttgccaacaatggtggccagctgccggggtattcttgatagaggcatacaaatt
gatggtcttggtatgaagagcttcatgacatatgaaagcaatgttctttttgctcttcgt
ttcatgattgattgcaacatagttggtggaaattggattgaggtccctgctggaaaatat
aagacagcgaagcattcgtcgtactgccaattagaattcgattgcctatattcagacttg
attagccatgctccagaaggggaattttcgaagatggctccatttcgcatattgagcttt
gacattgagtgtgctggccgtaaaggtcattttcctgagcctacccatgatcctgtaatc
cagattgcaaacctagtgactttgcagggagagaatgagccatttatccgtaatgtcatg
actctcaagtcatgctctcctatagttggtgttgatgtgatttcttttgatacagaaaga
gaagtcttgctggcttggagggatttaatccgtgaggtggacccagatgtcataattgga
tataacatctgtaaatttgatttgccatatctcattgagagagctgagaccttgggaata
gctgagtttccaatacttggccgcataaaaaatagcagggttcgggtcaaagatactact
ttttcttcaaggcagtatggaaccagggaaagtaaagaagtaacagttgaagggagggtt
caatttgatttactccaggctatgcaacgagattacaaattaagttcttattcattgaat
tctgtctcggcacactttctctctgagcagaaagaggatgtccaccattcaataatatct
gatcttcagaatggcaatgcagaaactaggaggcgacttgctgtgtattgtctaaaggat
gcttacctcccgcagaggcttttggacaaactgatgtatatttacaattatgtagagatg
gctcgagtgacaggtgttcccatatcatttcttctatccagagggcagagcatcaaggtg
ctttctcagcttcttaggaaggcaaaacaaaagaaccttcttattccaaatgtcaaacag
gctggatctgagcaagggaaatacgaaggtgccactgttttggaagcgaaggcaggattc
tttgaaaagccaattgccactttggattttgcatctttatatccatcaatcatgatggcc
tataatttatgctattgcactttggtgacaactgaagatgctcacaaactcaacatccct
ccagaatttgtcaacaaaactccatctggagaaacatttgttaaatccaatttgcagaag
ggaatacttcctgaaattctagaagaactactagctgctcgtaagagagcaaaagcagat
ttaaaggaagcaaaagatccacttgagaaggcagtgcttgatggtcgacaactggcctta
aaaataagtgcaaattccgtatatgggtttactggagctactattggtcagttaccatgc
atagagatatcatcaagtgtcacgagctatggtcgacagatgattgagcacacaaaaaat
cttgtaaaagaaaaatttaccacacttaaaggctatgaacacaatgctgaggttatatac
ggggacacagactccgttatggtgcaattcggtgtgtccaccgttgaagcagcaatgaac
ttggggagagaagctgctgaatacatcagtggaactttcataaaacctatcaagctggag
tttgagaaggtttattatccatatcttctgattagcaagaagagatatgctggtttattg
tggacaagtccagataagttcgacaagatggatactaaaggtattgaaacagtacgaaga
gacaattgcttgttggttaaaaacctggtaaatgagtgcctgcacaaattactgattgac
agagatattcctggggcagtccagtatgtcaagaataccatctcagatcttcttatgaat
cgcatggatttatcgctgttggttataactaagggtttgacaaaaactggggatgattat
gaagtaaaggcagctcatgttgaacttgctgaacgtatgcgtaagcgagatgctgccact
gctccaaatgttggggatcgagtaccttatgtcattattaaagctgcaaaaggtgccaag
gcatatgagaagtcagaggaccccatctatgtgctcgagaataacatacccatagaccct
caatactaccttgaaaatcaaattagcaagccacttttaagaatttttgagcccattttg
aagaatgctagcaaggaacttcttcatgggagtcacacacgatctatctcaatatctact
ccctcaaacagtggaataatgaaatttgcaaagaaacagctcacttgtgttggctgcaaa
gctctaattagcaacgcagatcgaactctttgctcgcactgtaagggaagagaagctgag
ctctattgcaaaacagtggctcatgtgtctgagctagaaacactttttgggcggttatgg
acacagtgccaagagtgccaaggctctcttcatcaagatgtgctctgcacaagtcgggat
tgccctatattttataggagaaagaaagcacagaaagacatggctgaagccaaagtgcaa
ttagaccgatggagcttctga
DBGET
integrated database retrieval system
