KEGG   Prunus avium (sweet cherry): 110759384
Entry
110759384         CDS       T05161                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03020  RNA polymerase
pavi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110759384
  09124 Replication and repair
   03420 Nucleotide excision repair
    110759384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110759384
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110759384
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110759384
  RNA polymerase III system
   RNA polymerase III
     110759384
  RNA polymerase I system
   RNA polymerase I
     110759384
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110759384
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 110759384
NCBI-ProteinID: XP_021817129
UniProt: A0A6P5SM03
LinkDB
Position
Unknown
AA seq 143 aa
MADEDYNDLDMGYEDEPPEPEIEEGAEEDVENINNDDLPGDTIEAEDKEEQAQVERPRKT
SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggacgaggattacaacgacttggatatgggatatgaagatgagccaccagagcca
gaaattgaagaaggtgcagaggaggatgtggagaatattaacaatgatgatcttccggga
gacaccattgaagctgaagacaaagaggagcaagcacaggtggaacgacctcggaaaacc
tcaaaatttatgaccaaatatgaacgtgctagaatcttgggtacccgtgcactgcagatt
agcatgaatgccccggtgatggttgaattggagggtgagactgacccacttgagattgct
atgaaggagcttcgtgagcggaagatacccttcaccatacgccgctacctgcctgatgga
agttacgaagactggggagtagatgaattgattgtggaggactcgtggaagagacaggtg
ggaggtgattga

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