KEGG   Prunus avium (sweet cherry): 110763912
Entry
110763912         CDS       T05161                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03020  RNA polymerase
pavi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110763912
  09124 Replication and repair
   03420 Nucleotide excision repair
    110763912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110763912
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110763912
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110763912
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110763912
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD zinc_ribbon_4
Other DBs
NCBI-GeneID: 110763912
NCBI-ProteinID: XP_021822501
UniProt: A0A6P5T5R3
LinkDB
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ
DVAADPTLPRTKAVRCSECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgccgcgaatgcaacaatatcttgtacccaaaagaggacaag
gaccagaagatcctcctctatgcgtgccgcaactgcgatcaccaggaggttgctgacaac
aactgtgtctacagaaatgagatacaccatgctgttggggaacgcactcaagtattgcaa
gatgtagctgcagatccaactctccctcgaaccaaagcagtgcgctgttcagagtgcaag
catggagaagctgtcttctttcaggcaactgctagaggagaggagggtatgacattgttc
tttgtttgctgcaaccccagctgtggccataggtggcgagactaa

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