Prunus avium (sweet cherry): 110765756
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Entry
110765756 CDS
T05161
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110765756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110765756
Enzymes [BR:
pavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110765756
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110765756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
110765756
NCBI-ProteinID:
XP_021824674
UniProt:
A0A6P5TBY4
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MTSKREEKMKKMFGKPSAESEDYAAVRELFRHHIESFDHFVTAGLETMLNKIKPIEVVDS
STGTSLAIWFGKPFLFPPQKEESKTARGKLLPFECRQAKLSYTGKLLADVYFKYNDGPAI
RENFNFGQLPIMLMSKLCHLRGANPEKLVSCKEESSEMGGYFVLNGLERVVRLVILPKRN
YPTSMVRNSFRDRKEGYTDKAVVIRCAREDQSSVTVKLYYLRNDSARLGFWIQGREYLLP
VGLVLKALIDTTDHEIYKNLTCCYVEKDESCDVNKYEKGKGNVGTQLVGERAHIILDEVR
DFITRRQCLEHIGGHFRPLMRGLEDESDLSVVGEAVLEDYIFVHLDKGFDKFNLLIFMVQ
KLFSLMDQTSLPDNPDALQNHEVLLPGHLITIYLKEKLEDWLQRAKKLLQDQINNKSKTF
DFCSLVNVKKVLDKNPSKHISLAVENMLKTGRLVTQSGLDLQQRAGLTVQAERLNYLRYL
SHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSYFDA
QGNIRNFLNIRESILTVLSELQMISSVPKLVQAGPPANLSVLLDGCVVGSISSKVIEKVV
AQLRRLKVSASSVIPDDLEVGYVPLSSRGAYPGLYLFTSPSRFVRPVKNISIPSDEGQNI
ELIGPFEQVFMEIRCPDGRDGGRKDAFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMY
QCQMAKQTMAFSLQALCNRADQKLYHLKTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLS
YTGYDMEDAMILNKSSVDRGMFHGLIYQTETIDLSDQKSRSDRSRKFFRRSNLNKNSSID
SDGLPYVGQTIKPNEELYSIHNEVTNESRSIKHKGSEPVIVDYVAIDGKKLLQKASIRFR
HPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLE
SVAAKGGSLHGKYVDATPFANSKNVNEDTPQQSKTLVDELGEMLKVKGFNYHGTEVMYSG
VYGTELTCEIFMGPVYYQRLRHMVSDKYQVRSTGTIDQITHQPIKGRKRGGGIRFGEMER
DSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSILTTSFVKPERRVGRAVKGLPPIRASK
KVICHACQTSRGMETVAMPYVFKYLAAELAAMNIKLTLQLNNAA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgaagagagaagagaagatgaagaagatgtttgggaagccatcggctgagtcg
gaggactacgcggcggtgcgtgagctcttcaggcaccacatagagtcattcgatcacttt
gtcactgctggtcttgagactatgctcaataaaatcaagcctatcgaagtcgtcgactct
tccaccggaacaagccttgcaatttggtttggcaaaccttttttattcccacctcaaaag
gaagaatcaaaaactgcccgtggaaagctgcttcctttcgaatgtagacaggctaaactt
tcctacacagggaaattactggcagatgtttactttaagtataatgacggacccgctata
agagagaatttcaattttgggcagcttcccatcatgctaatgtcaaagctttgccactta
agaggtgctaatcccgaaaagctagtttcttgcaaagaagagtcatcagaaatgggtggt
tactttgtgttaaatgggctcgagagagttgttcggcttgtcatattgccaaagcggaat
tatccaacgagtatggtgcgaaattcatttcgtgatcgaaaggaaggatatactgataag
gcagttgtaataaggtgtgcaagagaagatcaatcttcagtaacagtcaaattgtactac
cttcgtaatgatagtgcaagacttggattttggatacaagggagggaatacttgcttcct
gtgggtcttgtcttaaaggctcttattgacactactgatcacgaaatttataaaaatttg
acatgttgctatgtcgagaaagatgagagttgcgatgtcaataaatatgagaaaggaaag
ggtaatgttggcactcagcttgtgggtgagcgggcacacattattctagatgaagtgaga
gactttatcactcgccgtcaatgtctagagcacattggagggcacttccgacctcttatg
cgtggactggaggatgaaagtgatctttctgttgttggagaagctgttctagaggactac
atatttgttcaccttgataaagggtttgacaaattcaatctgctcatatttatggtgcag
aagcttttttctcttatggatcagacatccttgccagacaatccagatgccttgcaaaat
catgaagtcttactccctggtcacttgattaccatatatctcaaggaaaaactagaagat
tggttgcaaagggccaaaaaacttcttcaagatcagatcaacaacaaaagcaagactttt
gatttttgcagcttagtaaatgtaaagaaggttttggataaaaatccttcaaagcacatc
agtttagctgttgaaaatatgttgaaaaccggaaggcttgttacgcaatcaggtctagat
ttgcagcagagggcaggcttaacggttcaggcagagaggcttaattatttgcgttactta
tctcattttcgtgccgtccatcgaggagcttcatttgctggacttcgcaccacaagcgtg
cggaaattgctacctgaatcttggggttttctttgcccggtgcatacacctgatggagag
ccgtgtggcttgttgaaccatatgacttccacttgtagaattacatcctactttgatgca
caaggaaatattagaaacttcttgaatatccgagagtctattctcactgttctgagtgag
cttcaaatgatatcttcagtgccaaagctggttcaagctggtcctcctgcaaatctttct
gttcttttagatggctgtgttgttggttctatatcttccaaagtaattgagaaagttgtg
gctcagttaaggaggctgaaagtgtcagcttcttcagtgattcctgatgatctagaagtg
ggatatgtacccttaagctcgcgtggggcctatcctggtctgtaccttttcacttctcct
tctagatttgttcggccagtgaagaatatttcaattccttctgatgaaggtcaaaatatt
gaacttattgggccctttgaacaggttttcatggaaataagatgtcctgacggtcgagat
ggtggaaggaaagatgctttccctgcaactcatgaagaaattcatccaacgggaatgctt
agtgtcgtcgctagtcttacaccctggtcagatcataatcagagcccacgaaatatgtac
cagtgtcagatggcaaaacaaacaatggccttctctttgcaagcactttgcaatcgtgca
gatcaaaagctgtatcatcttaagactcctcagtctcccattgtacgtacaagtgcatat
aagaagtattgcattgatgaatatccaacaggcacaaatgcaatcgttgctgtactgtca
tatactgggtatgatatggaggatgccatgattttaaacaagtcatctgtggatcgtgga
atgtttcatggactaatttatcagacagaaacaattgacttgtctgatcaaaagagcagg
tcagatagatcacggaaattttttaggagaagtaacctcaataagaattcctcgatcgat
tcagatggtcttccttatgttggtcagacaataaaaccaaacgaagaattgtatagcatt
cataatgaggtgacaaatgagtcaagatccatcaaacacaaaggttcagagcctgttatt
gttgactatgttgctattgatgggaagaagcttcttcagaaggcgagcatacgctttcga
caccctagaaaccctgtcattggtgacaaatttagcagccgacatggacaaaagggtgtt
tgctcccagttgtggcctgatattgatatgccattttctggggttacaggaatgcgtcca
gatcttatcatcaatccacatgcattcccctcaaggatgacaatagcaatgctcttggaa
tcagtcgctgcaaagggaggtagcttacatggaaaatatgttgatgcaacaccatttgct
aattcaaagaatgttaatgaagatactccacaacaatcgaaaacacttgttgatgaactt
ggtgaaatgttaaaggttaaagggtttaactaccatggtacagaggtaatgtatagtggg
gtctatgggacagaactcacatgtgagatctttatgggtcctgtttattatcaacgccta
cgacatatggtttcagacaaatatcaggttcgttccactggaacgatagaccagatcacc
caccagcctatcaagggacgaaaacgaggtggtggtatacgttttggtgaaatggagcga
gactctatgcttgcccatggggcagcatatctgttgcacgacaggcttcatacgtgttcc
gattatcacattgctgatgtatgttctatatgtggaagcatcctaacgacctcatttgtc
aagccagaaagacgggttggacgtgcggttaagggactgccacccataagagcctcaaag
aaggtcatttgccatgcttgtcagacgagtagagggatggagacagttgcaatgccttat
gtcttcaaatatttagcagctgagttagcagctatgaacataaaattgaccctccagcta
aataatgcagcgtga
DBGET
integrated database retrieval system
