Prunus avium (sweet cherry): 110767065
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Entry
110767065 CDS
T05161
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavi03016
]
110767065
Enzymes [BR:
pavi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
110767065
Transfer RNA biogenesis [BR:
pavi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
110767065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
110767065
NCBI-ProteinID:
XP_021826190
UniProt:
A0A6P5TGK2
LinkDB
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Position
Unknown
AA seq
631 aa
AA seq
DB search
MEDIEDLLVGSGGGAPPGFRLPITAVGLNPKKNKNKNKPNPNGNSNKQSQIQDPLAPLSP
KIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYPLSDNPEEADLWLINTCTVKSPSQSA
MDTLIAKGKGAKKPLVVAGCVPQGSRDIKELEGVSIVGVQQIDRVVEIVEETLKGHEVRL
LSRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDGLVGRVKSV
IADGVKEIWLSSEDTGAYGRDIGANLPILLNAIVAELPSDASTMLRIGMTNPPFILEHLK
EIAEVLRHPCVYSFLHVPVQSGSDAVLTAMNREYTVSEFKTVVDILTELVPGMQIATDII
CGFPGETDEDFTQTLSLIKLYKFPQVHISQFYPRPGTPAARMKKVPSTVVKRRSRDLTSV
FEAFTPYVGMEGRVERIWITEVATDGIHLVGHTKGYVQVLVAAPESMLGTSAIVKITSVG
RWSVFGEVIETIPHINDTVSGNERPKQEKNFSGLNHYETSACSTKSKNCCCGPESCGGQS
EKCAETKNDVQLEDRNSRNLIGWLLRKRKNHVEKPVENEIALGSQKKQEQTQGSLGEWGV
VDRALLGGMLVSFLTIVTLLLHLGFRILSSN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatagaggatttgctagttgggagcggaggtggagctcctccgggttttcgt
ttgcccataacagccgtcggattgaacccaaagaagaacaagaacaagaacaaacccaat
cccaatggcaatagcaataagcaatctcaaatccaagacccccttgctcctctctccccc
aaaatccctggaactcagactatatatatcaagacatttgggtgctcacacaaccagagt
gacagtgaatatatggctggccaactttcagctttcggttatccattaagtgacaatcct
gaggaggcagacctgtggctcataaatacatgcacagtcaaatctccaagtcaatctgcc
atggatactctgatagcaaaaggtaaaggtgcaaaaaagcccctggtggtggctgggtgt
gtgccgcaaggaagtcgagatataaaagagctagaaggtgtcagcattgtaggagtccag
caaattgaccgtgtggttgaaattgttgaagagactttgaaaggtcatgaggtgcgcctt
ttgagccgtaagacattgccagcgcttgacctccctaaggtgaggaaaaacaagtttgtt
gagattctccctattaacgttggttgtttaggtgcttgcacttactgcaagactaagcat
gctcgtggtcatttagggagttatactgttgatggccttgtgggacgtgtaaaatctgtg
atagctgacggagtcaaagaaatatggttgagcagtgaggatactggagcttatggtcgt
gacattggtgccaatctaccaattttattgaatgcaattgttgcagaactcccttcagat
gcaagcacaatgcttcgaattgggatgacaaatcctcctttcattctggagcacttgaaa
gaaatagcagaagttttgcgacatccatgtgtatactcatttctacatgtaccagtccaa
tctggaagtgatgctgtcttaactgcaatgaatcgggaatatactgtaagcgagttcaag
actgtggtagatatcctaactgagcttgtgccagggatgcagattgcaactgatataata
tgtggatttcctggtgaaacggatgaagattttactcaaactcttagccttattaagctg
tacaagttccctcaagttcatatttcacagttctatcctcgaccaggaacacctgctgca
aggatgaaaaaggtccccagtactgtagtgaagagaaggagtcgtgacttgacttctgtt
tttgaagctttcacaccatatgttgggatggagggcagggtggaaagaatatggataact
gaagttgccactgatggaattcacttggttggccataccaagggatatgtgcaggtgctt
gtagctgctccagaaagtatgttggggacttcagctattgtgaagatcacatctgttgga
aggtggtcagttttcggagaagtgattgagactattcctcatataaatgatacagtttca
ggaaatgaaaggcctaagcaggaaaaaaatttctctggtttgaaccattatgagactagt
gcatgttcaacaaagtcgaaaaattgttgttgtggaccagaaagctgtggaggacagtcg
gaaaagtgtgctgaaacaaagaatgacgttcagctggaagacaggaacagcagaaatctg
attggatggctactgaggaagcgaaaaaaccatgttgagaaacctgtggagaatgaaata
gccttgggatcccagaaaaagcaagagcagacccaaggaagcttgggtgaatggggtgtt
gttgatcgggctcttctaggcgggatgcttgtgagcttcctgacaattgtaactctacta
ttacatcttggatttaggattctgtcatctaattag
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