Pseudomonas azerbaijanorientalis: KSS91_06565
Help
Entry
KSS91_06565 CDS
T07706
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
paze
Pseudomonas azerbaijanorientalis
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paze03009
]
KSS91_06565 (rimO)
Enzymes [BR:
paze01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KSS91_06565 (rimO)
Ribosome biogenesis [BR:
paze03009
]
Prokaryotic type
ribosomal protein modification factors
KSS91_06565 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXH63148
LinkDB
All DBs
Position
complement(1506160..1507497)
Genome browser
AA seq
445 aa
AA seq
DB search
MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANDLDLEIVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatccaaaggttggcttcgtatccctgggttgcccc
aaagcactggtcgactccgagcgcatccttacccagctgcgcatggaaggctatgacgtc
gtgtccacctaccaggacgccgacgtcgtggtggtcaacacctgcggcttcatcgattcg
gccaaggccgagtctctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtcgaagaaggcaacattcgcgacgtacacccaagcgtgctg
gccgtgaccggtccgcagcagtacgagcaagtggtcaacgccgtgcacgaagtcgtgccg
ccacgccaggaccacaacccgctgatcgacctggtgccgccacaaggcatcaagctgact
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtcagccgtccggtgggcgacgtgctcgacgag
gcccagcgcctggtcaagtccggcgtcaaggagctgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgcgaagccctgagcaccctcggcgtctgggttcgcctgcactac
gtttacccgtacccgcacgttgacgaactgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaggtgttgaagtcgatgaagcgc
ccggccttcgaagacaagaccctggcacgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgctcgaccttcatcgtcggcttcccgggcgaaaccgaagaggacttccag
tacctgctgaactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggttgaaggcgcaccggccaatgacctggacctggaaatcgtccccgacgacgtcaag
caggaccgttgggagcgcttcatggcgcaccagcaagccatcagctcggcgcgcctgcaa
atgcgcatcggccgcgagatcgaagtgttggtcgatgaagtcgacgagcaaggcgccgtc
ggccgctgcttcttcgacgccccggaaatcgatggcaacgtattcatcgacaacggcagc
aacctcaagccaggcgacaaggtctggtgcaaggtgaccgacgccgacgaatacgatctg
tgggctgaacagatctaa
DBGET
integrated database retrieval system
