Pseudomonas azotoformans: AYR47_08875
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Entry
AYR47_08875 CDS
T04879
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo00730
Thiamine metabolism
pazo01100
Metabolic pathways
pazo01240
Biosynthesis of cofactors
pazo04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AYR47_08875
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AYR47_08875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pazo03016
]
AYR47_08875
Enzymes [BR:
pazo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AYR47_08875
Transfer RNA biogenesis [BR:
pazo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AYR47_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AMN78427
UniProt:
A0A127HVJ4
LinkDB
All DBs
Position
1902450..1903904
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETRVTEPK
ALKDMTERLSCMPGIAHFLQVDEYPLGDFDDITEKCKQHYGSELEGKIFSVRCKRAGKHT
FSSMDVEKYVGSKLRRECGAAGISLKAPQIEVRMEIRDQRLFVIHSQHNSIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNGHMGVVLKRMMLRAASQIADRLQIDALVTGEAISQVSSQTL
PNLSIIDCVTEKLVLRPLIASHKQDIIDLAEEIGTADFAKHMPEYCGVISVNPKTHAKRH
RVEHEEKEFDMAILERALENAKLVPIDRVIDELGQDVKIEEVSEALAGQIVIDIRHPDAA
EDEPLEIAGIDVQTLPFYALNARFKELDNSRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatcgtaaaagtcttccccgagatcaccatcaaaagccgaccggtacggacg
cgtttcatccgtcaattggccaagaacatccgtgccgtgctccgcgatctggacccggct
gtggtggtgaacggcgtgtgggacaacctcgagctggaaacccgtgtcaccgagcccaaa
gccttgaaggacatgaccgagcgcctgagctgcatgccgggcatcgcgcatttcctgcag
gtggatgagtacccgctgggcgacttcgacgacatcaccgagaagtgcaaacagcactac
ggcagcgagctggaaggcaagatcttttcggtgcgctgcaagcgtgccggcaagcacact
ttcagctccatggacgtcgaaaaatacgtcggcagcaagctgcgtcgcgagtgcggcgca
gccggaatttccctgaaagcgccacaaattgaagtgcgcatggaaattcgcgaccaacgg
ttgtttgtcatccacagccagcacaacagcatcggcggttatccgttgggtgccctggaa
cagaccctggtcttgatgtccggcggtttcgattccacggttgctgcttaccagatcatg
cgccgcggcctgatgagccacttctgcttctttaacttgggcgggcgtgcacacgaattg
ggcgtgatggaagtcgcgcactttatctggaagaagtacggcagctcccaacgcgtgcta
tttgtgagcgtaccgttcgaagaagtgctgggcgaaattctcggcaaagtcgataacggt
catatgggcgtggtattgaagcgtatgatgttgcgcgccgcgtcgcagattgccgaccgc
ttgcagatcgacgcactggtgaccggtgaggcgatctcccaggtgtccagccagacgctg
ccgaacctgtcgatcatcgactgcgttaccgagaagctggtgttgcgcccgctgatcgcc
agtcacaagcaggacatcatcgacctggcagaagaaatcggcaccgccgacttcgccaag
cacatgcctgagtactgcggggtcatttcggtgaatcccaagacccacgccaagcgtcac
cgcgtggagcatgaagagaaagaattcgacatggcgattctggagcgtgcgctcgagaac
gccaagctggtcccgatcgatcgcgtgatcgacgaactgggccaggatgtgaagatcgaa
gaagtcagcgaagccctggccggccagatcgtcatcgacatccgtcacccggatgccgct
gaagatgagccgctggaaatcgccggcatcgacgtacaaacgctgccgttctatgcattg
aacgcgcgtttcaaggaactggataacagccgtcagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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