Paenibacillus barcinonensis: HUB98_26665
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Entry
HUB98_26665 CDS
T06922
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac03030
DNA replication
pbac03410
Base excision repair
pbac03420
Nucleotide excision repair
pbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUB98_26665 (polA)
03410 Base excision repair
HUB98_26665 (polA)
03420 Nucleotide excision repair
HUB98_26665 (polA)
03440 Homologous recombination
HUB98_26665 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbac03032
]
HUB98_26665 (polA)
03400 DNA repair and recombination proteins [BR:
pbac03400
]
HUB98_26665 (polA)
Enzymes [BR:
pbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUB98_26665 (polA)
DNA replication proteins [BR:
pbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUB98_26665 (polA)
DNA repair and recombination proteins [BR:
pbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HUB98_26665 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUB98_26665 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
DNA_pol_A_exo1
HHH_2
HTH_60
Motif
Other DBs
NCBI-ProteinID:
QKS59434
LinkDB
All DBs
Position
5839302..5841956
Genome browser
AA seq
884 aa
AA seq
DB search
MDKLILIDGNSIIYRAFFAMPPLTNSKGLHTNAVYGFTTMLLRLLEEHKPTHLMVAFDAG
KVTFRHEGYQEYKGGREKTPPELSEQFPLLKELLQGLGIAQFELAGYEADDIIGTLTKRA
DDAGRQVLVVSGDKDMLQLASDHVHIGLTRKGVTEIELYDPAQIKERYGLTPLQIIDLKG
LMGDASDNIPGIPGVGEKTALKLLHQFGSVEEVLNGTGELKGKMKEKIEAHAEDARMSKQ
LATIHREVPLEQTWEDMQFDGLKEASAGPALAKLEFKSLLERLSFSGSIRSEQEAVPAAE
VESTIATEDNLAEWMNVLDSIDVLHVETHGDNPHQAKLVGLAVGAGEKYIYFSPELLQSD
VAAPVREWLANADCPKRGYDLHRVDLALHAHGITFAGAAFDVQLAAYLLDPTESNQTISG
LTSKYGLPSLVEDDSVMGKGAKYKVPDADVLSDFLCRKAAALAAIIPLQEQVLESDEMNS
LFHELEMPLSRILADMEKQGIKANTADLQTLGSEFEEQIGRLMSEIYKLSGTEFNLNSPR
QLGEILFDKLGLPVVKKTKTGYSTDAEVLEKLAPYNDVVQHILQYRQLAKLQSTYVEGLL
KEISDRDGKVHTFYRQTIAATGRLSSQFPNLQNIPIRMEEGRKIRKVFVPSEPGWSILAA
DYSQIELRVLAHISDDERLKEAFVHDMDIHTKTASDVFGVKPEDVDSDMRRSAKAVNFGI
VYGISDYGLSQNLNITRKEAAQFIDQYFEIFQGVRRYMDDIVKDARRDGYVKTMLERRRY
LPEINASNFNLRSFAERTAMNTPIQGTAADIIKLAMVQMDEALRERKLQSRMLLQVHDEL
VFEVPPEEMELMKELVPAVMEKALKLSVPLKAEVSYGQNWYEAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttgattcttatagatggcaatagcattatttaccgggcattttttgcaatg
cctcccctgacaaattcgaaaggtctgcataccaatgcggtctatggcttcacaacgatg
ctgttaaggctgctggaggagcataagccgacacatctgatggtggcgtttgatgcgggc
aaagtgacattccgtcatgaagggtatcaggaatataagggtggacgggagaaaacaccg
ccagagctgtcagagcagtttccattgctcaaggagctgctgcagggactcggaattgca
cagtttgagctggctggttatgaagccgatgatatcatcggtacactcaccaaacgtgca
gatgatgcaggcagacaggtgctggtggtgtcgggtgacaaagatatgctgcagctcgct
tccgaccatgtacatatcgggctgacgcgtaaaggggtcaccgagattgagctgtatgat
cccgctcaaattaaggagcgttacggattaacgcctctgcaaattattgatcttaaaggt
ttgatgggagatgcctctgataacattccaggtattccaggcgtcggagagaaaacagcg
ctcaagctgctgcatcagttcgggtcggtggaagaggtgctgaacggcacaggtgagctg
aagggcaagatgaaggaaaagatcgaagctcacgccgaggacgctcgtatgagcaaacag
cttgcgaccattcatcgtgaggttccgctggagcagacgtgggaggatatgcagtttgat
ggactaaaggaagccagtgcagggcccgccttggccaagctggagttcaaatcgttgctg
gagcgcttgtctttcagcggtagtatccgttccgagcaagaagctgttcccgccgctgag
gtagaatccaccattgctacagaagataacctggcggaatggatgaacgtgctggattct
atcgacgtgcttcatgtagaaacgcatggagataacccccatcaggccaagctggtcggc
cttgctgtgggtgcaggggagaagtacatatatttttctcctgagctgcttcagtcggat
gtggcggcacctgtacgggaatggcttgcgaatgcggattgtccgaaacgcggatatgat
ctgcaccgtgttgatctggcgctgcatgcgcacggaataacgtttgctggtgcggcattt
gatgtgcagctggctgcctatttgctagatccaacggagtcaaatcagacgatcagcggt
ttgacgtccaagtacggattgccttcgctggttgaagatgatagcgtcatgggcaaaggg
gccaagtacaaggtgccggatgcggatgtgctaagcgatttcctctgccggaaagcggct
gcgctggctgccattatcccgctgcaggagcaggtactggagagcgatgagatgaattca
ctgttccatgagcttgaaatgccgttatcccgtattctggcggatatggagaagcagggg
atcaaagccaatacagcggaccttcagacactcggcagtgaatttgaagaacagatcggc
aggctgatgtctgagatttacaagctgtccggtacggaatttaatctgaattcaccgaga
cagctgggtgagatcttgtttgataagcttgggctgcctgttgtgaaaaaaacaaagacc
ggctactcgacagatgccgaggtgcttgagaagctggccccgtataatgacgtggttcag
catattttgcagtatcgtcagctggccaagctacaatccacgtatgttgaaggcttgctg
aaggagatatcggaccgcgatggtaaggtgcatacgttctatcgtcagacgattgcagcg
acaggacgtttgagcagtcagttcccgaacctgcagaatattccgattcgcatggaggaa
ggacgcaaaattcggaaggtatttgtaccgtccgagccgggctggtccatactggccgca
gattattcgcagattgagctgcgtgtgctggctcacatttcggatgatgagcggctgaag
gaagcttttgtacatgatatggatattcatacgaagacggcttctgatgtgttcggtgtc
aagccggaggatgtagacagcgatatgcgccgttccgccaaggcggttaacttcggcatc
gtatacggcatcagcgattacgggctttcccagaatctgaacattacgcgtaaagaagcg
gcgcagttcattgatcagtatttcgaaatattccagggtgtacgccgatatatggatgac
attgtgaaggatgcgcgccgggacgggtatgttaaaacgatgctggaacgccgccgttat
ctgccggaaatcaatgccagcaacttcaatctgcgttccttcgccgagcgtacggcgatg
aatacaccgattcaaggtacggctgctgatattatcaagctggcgatggtgcagatggat
gaggcgctccgcgaacgcaagcttcagagccgtatgctgcttcaggtacacgatgagctt
gtatttgaagtgccaccagaggaaatggagctcatgaaggagcttgttcctgcggtgatg
gaaaaagcgctgaagctatcggttccgctaaaagctgaggttagttatggacagaactgg
tacgaggcaaaatag
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