Parviterribacteraceae bacterium J379: LRS13_12140
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Entry
LRS13_12140 CDS
T09859
Name
(GenBank) M20/M25/M40 family metallo-hydrolase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pbaj
Parviterribacteraceae bacterium J379
Pathway
pbaj00300
Lysine biosynthesis
pbaj01100
Metabolic pathways
pbaj01120
Microbial metabolism in diverse environments
pbaj01230
Biosynthesis of amino acids
Module
pbaj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRS13_12140
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbaj01002
]
LRS13_12140
Enzymes [BR:
pbaj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LRS13_12140
Peptidases and inhibitors [BR:
pbaj01002
]
Metallo peptidases
Family M20
LRS13_12140
BRITE hierarchy
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UUY06221
LinkDB
All DBs
Position
2480194..2481318
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AA seq
374 aa
AA seq
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MDERALAERLIRYDTSTHDGLQSAAGFVRGWLESNEVAVEARDFDGLPVLHADVGATDPE
APTVIWHGHLDVVPAFDEQFEPCVDGDRLIGRGAYDMKGALASILCALVDVKAQDAVRVR
MVCVPDEESEDVDRRSTDELVKEGLRGDFALTGEPTDLHIGVQAKGVLAFRAEIRGRAAH
GSTPWLGDNAILKAHDAFRRIETLPFSRQSSDLFDRPSINLARIEGGDAFNKVPDRCTMD
VDIRYLPNQDPQDILAQIDAISDVHVIKQFVRAPAIVSRRNPYVLALRDAVSEVNGGDVL
SVGRDGASDAFAFLEAGIPAVEFGPVGAGHHGPDEWVSISSLRRYREALRDFVLTLPDQL
AQTAPEQAVEGGLS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcgcgccctggcggagcgcctcatccgctacgacacctccacgcacgacggg
ctgcagagcgccgccgggttcgtgcgagggtggctggaatccaacgaagttgccgtggaa
gcccgcgacttcgacggtcttccggtgcttcatgcggatgtgggcgccaccgatcccgaa
gctccgaccgtgatctggcacgggcacctcgacgtcgttcccgcgttcgacgagcagttc
gagccctgcgtcgacggcgatcgcctcatcgggcgcggcgcctacgacatgaagggtgcg
ctggcgtcgatcctctgcgcgctcgtggacgtcaaggcccaggacgccgtccgggtccgc
atggtctgcgtgcccgacgaggagtccgaggacgtcgaccgccgcagcaccgacgagctc
gtcaaggaggggctgcgcggggacttcgccctcaccggcgagccgacggacctgcacatc
ggcgtccaggcgaagggcgtgctggcgttccgtgcggagatccgcgggcgcgccgcgcac
ggctcgacgccgtggctcggtgacaacgcgatcctcaaggcgcacgacgcgttccgtcgc
atcgagaccctaccgttcagtcggcagtcctccgacctgttcgaccgcccctccatcaac
ctcgcgcggatcgagggcggggacgcgttcaacaaggtgcccgaccgctgcacgatggac
gttgacatccggtatctgcccaaccaggacccgcaggacatcctcgcgcagatcgacgcg
atctccgacgtgcacgtcatcaagcagttcgtccgcgcgccggcgatcgtctcgcgccgc
aacccgtacgtcctcgccctgcgcgacgccgtcagcgaggtcaacggcggcgacgtgctg
agcgtcggccgcgacggcgcctccgacgcgttcgcgttcctggaggccggcatcccggcc
gtggagttcgggccggtcggcgccgggcatcacgggcctgacgagtgggtgtcgatctcc
tcgctgcgccggtaccgcgaggcgctgcgcgacttcgtcctgaccctgcccgaccagctg
gcgcagaccgcgcccgagcaggccgtcgagggagggctgtcgtga
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