Pogonomyrmex barbatus (red harvester ant): 105426630
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Entry
105426630 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105426630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105426630
Enzymes [BR:
pbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105426630
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105426630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
105426630
NCBI-ProteinID:
XP_011636236
UniProt:
A0A6I9W4G1
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MIKNSLELCSTCGHNGFKCPGHFGHIELPVPVVNPLFYKALSMLIRLSCPNCFSLQVPSY
IKLLLSAKLKLLYQGQLSDLESLDQEVMSMISSVQKVEEQTEYVRNIIDTYMQNFFNKTR
YNRVTSENHEDQISMKNIIMQWHIYVENILKQYVRVNKAGICEKCHEGLPKISTLQNKIM
ITNKRVASSNSTGEVTHKLESVMIMPDQSKEHLRQLWNNEKDFLKVIVPCLELVDIEYPT
DVFFFEVIPVLPPIVRPVNFLNGQMIEHPQTHIYKSIIQDCLVLRNIIQTIQDGGTEHLP
QEGRLVFEQIKGTTAIEKLHNAWQALQSNVDHLMDRDMNKTPESINGQGLKQILEKKEGI
IRMHMMGKRVNYAARSVVTPDPDLNIDEIGIPEAFARKLTYPTAITPWNVVELRQLVLNG
PNVHPGAVMVENEDGSVQAIDSNNAMQREAIAKRLLTTSDRTESFIGVKVVHRHLQNGDI
LLLNRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDELNAHFPQNELARSE
SYNIANVSNQYLVPKDGSPLSGLIQDYMVSGVRLTIRGTFFSNVHYRQLVYAALPITQQN
LILLPPTIIKPEMLWSGKQVLSTIIINIIPSHKVRINLVSNTKINSKEWQVEAPRRWKCG
TEFKNPVTMSEAEVIIRHGELLCGVLDKMHYGATPYGLIHCVYELYGGICASEMLSAFGK
LFQIFLRNEGFTLGVEDILVTGKTDKKRKEIISNCKKIGENVQKSVIKVPDDTPINEVRA
KMEEFYWNNPKFHAQVDQKYKNTLDVYTNDINKVCLLTGLVKKFPDNNLQLMVQSGAKGS
TVNTMQISCLLGQSELEGKRPPLMISGKSLSSFLTYDPTPRAGGFIDGRFMTGIKSQECF
FHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEGLIVNYDATVRDYDGSLIQFYYGEDGLD
IPGSRFLKKEQIAFLIDNKDLIMDEKLIECLKTNNEEIPKMXKKIKKWENKNGSSLQKRR
ISAFSKFSIENSNKNNSAKRQSIQSGRSKTALSLMRKWIRAKEEVKESFRAQCVKCPDPI
TSKYRHDIEFGVLPERIEGLINEYLSDPSRKKIKTSTLRDLLSIKVMKTICPPGEPVGLL
AAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMTASRNIKTPSMEIPFQNNLEN
LEKQAKKLKLKLTRCILSDVLKDIAISRKIEESPNRRLVYTLMIKYLPHKYYKRKFSVHP
RDIIKCTEEIFFKNIFKGIGKLAKVSKVLLHFEGEKSRANDEDSAIDQIDPDDVIPENIK
SRTRLDLGEMHESSDEEQAAEDADATMTRSLSRHRENQEYEDSEEEEIEDANKEEETDNN
NTDNIFENKDDADDDDNTEKLNNKKNKKFANRKEWVVNSYPNAIDYDYDENKLSWCKFTF
WLPLETIKLDLPEIIKNVAGKTVLWETPCIKKAFTFQNSVGETILKTDGLNIVEMFKYDN
ILDLSRLYSNDIYNISQTYGIEAANRVIIKEVRDVFKMYGITVDSRHLSLIADYMTFDGT
FKPLSRKGMESSASPLQQISFESSLGFLKTATLQGRKDDILSPSSRLMLGRPCKSGTGSF
SVLSSLYSV
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaatagtctggagctatgcagcacttgtggacataatggtttcaaatgtcca
ggtcattttggtcatatagaattaccagtacctgttgtcaatccattattttataaagca
ttatccatgttaatcagactatcatgtccaaattgcttttcattacaagtaccatcatat
atcaaactattgttatctgcaaaattaaaattactttatcaaggacaacttagtgatctc
gagagtttggatcaagaagtaatgtctatgatatcaagtgtccaaaaagtagaggaacaa
acggaatatgttcgcaatataattgatacttatatgcaaaactttttcaataagactaga
tacaatcgagttacatctgaaaatcatgaggatcaaattagtatgaaaaacatcattatg
caatggcatatatatgttgaaaacatacttaaacaatatgtgagagtcaacaaggctgga
atatgcgaaaagtgtcacgaaggtcttccaaaaatatcgaccttgcaaaacaagataatg
ataaccaataagagagttgcatcttctaattccaccggcgaagtgacacataaattggaa
tcagtgatgatcatgccggatcaatctaaggaacatcttcgtcaattgtggaacaatgaa
aaggattttcttaaagtgattgtaccctgcttagaactggttgatattgaatatcctacc
gacgtattctttttcgaagtaatacctgtattaccaccgattgtacgtccagtaaatttt
cttaatggtcagatgatcgaacatcctcaaactcatatctataagagcatcatacaggac
tgtctggtcttaagaaacatcatacaaacgattcaggacggaggtactgagcacttgcct
caagagggtcgacttgttttcgagcaaatcaaaggaacgacggcgattgaaaaattacac
aatgcatggcaggcattgcagagcaatgtggatcacctgatggatcgcgatatgaacaag
acaccggaatccatcaacggccaaggtttaaaacaaattcttgaaaagaaagaaggtata
attagaatgcacatgatgggtaaaagagtaaattatgccgcacgttcggtcgtcactcca
gatcctgacttgaatatcgacgagattggcattcctgaagcttttgcccgcaaattaaca
tatcccacagcaataacgccgtggaacgtggtcgaattaagacaattggttctgaacggt
cctaacgttcatcctggtgcagttatggtggagaatgaagatggatcggtgcaagctatt
gatagtaacaatgctatgcaaagagaagctatcgcgaaacgactcttaacaacgagtgac
aggactgagtccttcattggtgttaaagtggtacatcgacatcttcagaatggcgatatc
ctgttgttaaataggcaaccgacattacacaaaccgagtataatggctcataaagcacgg
gttcttaagggagagaagacattacatcttcattatgcaaattgcaaagcttacaatgcc
gattttgatggagatgaactcaacgctcatttcccacaaaacgaattagccagaagtgaa
agctacaacatcgcaaacgtatcgaatcagtacctcgtaccaaaagatggatctccgtta
agtggtcttatacaggattatatggtgtctggagtacgattaacaattagaggtacattt
ttctcgaacgtgcattacaggcaactagtttacgcagcactgccgataacacaacagaat
ctgattctcttaccaccgactatcatcaaaccagaaatgctatggtccggtaaacaagtt
ctttcgacgattatcattaatattattccttcgcacaaggtgcgaatcaatttggtctcc
aacacgaagatcaattcaaaagaatggcaagtggaagcaccacgacgttggaagtgtgga
acggaatttaaaaatccagtgacgatgtcagaggctgaagttataattcgacacggggag
ttattatgtggagtactcgataagatgcactacggtgcgactccatatggtcttattcat
tgcgtttacgaattatacgggggaatatgcgcgagcgaaatgttaagcgcatttggaaaa
ctatttcagatatttctacggaatgagggatttactcttggcgtcgaagatattttagta
actggtaaaaccgataagaagcgcaaagagattatttctaattgtaaaaagatcggggaa
aatgtacagaaatctgtgataaaagtacctgatgatacacctataaatgaagttcgcgcc
aaaatggaagaattctattggaacaaccccaagtttcacgcgcaagttgatcagaaatat
aagaacactttagacgtttataccaacgatattaacaaagtttgtctgctgacaggactc
gtcaagaaattcccagacaataacttgcagcttatggtgcaatctggtgctaagggatct
acggtcaacactatgcaaatatcatgtttgcttggtcagagcgagttagaaggtaaaagg
ccaccgttaatgatcagcggaaaaagcttatcgagtttcctaacgtacgacccgacacct
agagccggtggctttatcgatggtagatttatgactggtatcaaatcgcaggaatgtttc
ttccattgtatggcaggacgcgaaggtcttgttgatactgccgtaaaaaccagcagatcc
ggttacttacagagatgtttagtaaaacatttggaaggtttaattgttaattacgacgcg
acagtcagagattatgatggcagtttaatccaattttattatggagaggatggccttgat
ataccaggctcacgttttttaaagaaggaacaaatcgcgttcctaattgacaataaagat
ttgattatggatgagaagttaatagaatgtctaaaaacaaataatgaggagataccgaaa
atgnataaaaaaattaagaaatgggaaaataaaaatggttcttccttacaaaagaggagg
atcagtgcgtttagtaaattctccatagagaattccaataagaataacagtgcaaaaaga
caatctatccagagtggaagaagcaaaaccgcattgtcgctcatgagaaagtggataaga
gcgaaggaagaggtgaaggaatcattccgtgcgcaatgcgttaaatgtcctgatccaata
acgtcaaaatacaggcacgatattgaatttggcgtactgcctgaacgaatagaaggctta
ataaatgaatatctctctgatccgtcgagaaagaaaattaaaacgtctaccttgagagat
ttattatctataaaagtcatgaaaacaatttgtccacctggtgaaccagttggtttatta
gcggcacagtccataggtgaaccatctactcaaatgactctaaacacattccattttgcg
ggacgtggagagatgaacgtgactttaggtattcctagattacgtgaaatattgatgacg
gcatcgaggaacataaagactcctagtatggaaataccttttcaaaataatctggaaaat
cttgaaaagcaggcaaagaagttaaaattaaaattaacaaggtgtatcttgtccgatgta
ttgaaagatatcgcgataagcagaaaaatagaagagagtccaaatagaagattagtgtac
actcttatgattaaatatcttcctcacaaatattataagcgaaagttttctgttcatccg
cgagatataattaagtgtaccgaggaaatctttttcaagaatatattcaaaggaattggg
aaacttgccaaagtatccaaagttttgttacattttgaaggcgaaaaaagccgggcgaat
gacgaggactcggcgatagatcagattgatcctgacgacgtaataccggaaaatataaaa
agcagaacacggttagatttaggagagatgcatgagtcatccgatgaagaacaagctgca
gaagatgctgacgcgacaatgactagatcactatcgcgtcatcgagaaaaccaagaatac
gaagattccgaagaagaagaaattgaagatgcaaataaggaggaagaaacagataataat
aatacagataatattttcgagaataaagatgatgcggacgatgatgataatactgagaaa
ttaaataataaaaaaaataaaaaatttgctaacaggaaggaatgggtcgtaaattcatat
ccgaacgctatagattacgattatgatgagaataaattatcatggtgtaaattcaccttt
tggttaccgcttgaaacgatcaaattggacttgccagagataattaaaaatgtcgcaggt
aaaactgtcttatgggaaacaccgtgcattaaaaaagcttttacatttcaaaatagcgta
ggcgaaacaattctcaagacagatggtttaaatatagtggaaatgttcaaatatgacaac
atacttgatttaagcagattatattctaatgatatttacaatatatctcaaacatatgga
attgaagccgcaaatagagttattataaaagaagttagggatgttttcaagatgtatggt
atcaccgtcgactcgagacatctgtccttaatcgcagattatatgaccttcgatggtaca
ttcaaaccacttagccgaaaaggaatggaaagctctgcttcaccgttacaacaaataagt
ttcgaaagttcgttaggtttcttgaaaacggcaacattgcaaggaagaaaagacgacata
ttatcaccctcaagtaggttgatgttaggacgaccgtgcaaatctggaactggatcattc
tctgttttatcatcactgtacagtgtataa
DBGET
integrated database retrieval system
