Polaribacter batillariae: JL193_15645
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Entry
JL193_15645 CDS
T08207
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbat
Polaribacter batillariae
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbat03009
]
JL193_15645 (rimO)
Enzymes [BR:
pbat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JL193_15645 (rimO)
Ribosome biogenesis [BR:
pbat03009
]
Prokaryotic type
ribosomal protein modification factors
JL193_15645 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QTD37490
LinkDB
All DBs
Position
3560632..3561987
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AA seq
451 aa
AA seq
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MRTKTIKKNKINVVTLGCSKNIYDSEVLMGQLKANGKNVVHEDENDDGNIVVINTCGFIG
KAKEESIDTILHYANRKEAGEIDKVFVSGCLSERYKPDLEEQIPNIDQYFGTHDLPNLLK
VLEADYKHELIGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKHVSTPIEDIVTEAT
KLAEKGIKEIMLIAQDLTYYGLDIYKKRALADLLEALVKVDGIEWIRMHYAFPTGFPMDV
LEVMKREPKVCNYLDIPLQHINTELLKSMKRGTTHEKTTALIRKFREVVPEMAIRTTLIV
GYPGETEEMFQELKDWVEEMRFERLGAFEYSHEENTGAYALEDNVLAEVKFKRVNKIMEI
QSQISWELNQQKIGKTFKCLFDRKDGEYFYGRTEFDSPDVDNDVLVDAKKHYIKIGEFID
VKIYDAGDYDLYGIPVKKQEKPVPLNQRKNK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaaaccatcaaaaaaaataaaattaacgtggttactttaggttgttctaaa
aacatttacgattcggaagtgttaatggggcaattaaaagccaatggtaaaaacgtggtg
cacgaagacgaaaatgatgatggaaatatcgtggtaattaatacctgtggttttattgga
aaagcaaaagaagaatctatcgatacgattttgcattatgcaaacagaaaagaagctggc
gaaatcgataaagtgtttgtttctggatgtttaagcgagcgttacaaaccagatttagaa
gaacaaattcctaatatagaccaatattttgggacacacgatttgcccaatttattaaag
gttttagaagcagattacaaacacgaattaattggagaacgcttaacaacaacaccaaaa
cactacgcatatttaaaaattgcagaaggttgtgataggccttgctcgttttgtgccatt
cctttaatgagaggaaaacatgtttctacacctattgaagatattgttacagaggcaaca
aaattggcagaaaaaggtatcaaagaaatcatgttaatcgcacaagatttaacttattac
ggattagatatttacaaaaaacgtgctttggcagatttgttagaagcccttgtaaaggta
gatggaatcgaatggattcgtatgcattacgcgtttccaacgggttttccaatggacgtt
ttagaagtgatgaaacgcgaaccaaaagtgtgtaattatttagacattcctttacaacac
attaatacagagctattaaagtcgatgaaacgtggaacaacacacgaaaaaacaacggct
ttaattcgtaagtttagagaagttgttccagaaatggccattagaacgaccttaattgta
ggatatcctggagaaacagaagaaatgtttcaagaactaaaagattgggtagaagaaatg
cgtttcgagcgtttaggggcttttgaatattcgcacgaagaaaatactggagcctatgct
ttagaagacaatgtgcttgcagaagtgaaatttaaacgtgtgaataaaattatggaaatt
cagtctcaaatttcttgggaattgaatcaacaaaaaataggcaaaacttttaaatgtttg
ttcgatagaaaagatggagaatatttttacggaagaacagaatttgattcgccagatgta
gataacgatgttttagtggatgccaaaaaacactatattaaaataggagagtttatagac
gtaaaaatttacgatgctggagattacgatttgtatggaatccctgtgaaaaagcaagaa
aaacctgttcctttgaatcaaagaaaaaataagtaa
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