Thiopseudomonas alkaliphila: AKN87_05095
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Entry
AKN87_05095 CDS
T04152
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb00071
Fatty acid degradation
pbb00280
Valine, leucine and isoleucine degradation
pbb00310
Lysine degradation
pbb00362
Benzoate degradation
pbb00380
Tryptophan metabolism
pbb00410
beta-Alanine metabolism
pbb00640
Propanoate metabolism
pbb00650
Butanoate metabolism
pbb00907
Pinene, camphor and geraniol degradation
pbb00930
Caprolactam degradation
pbb01100
Metabolic pathways
pbb01110
Biosynthesis of secondary metabolites
pbb01120
Microbial metabolism in diverse environments
pbb01200
Carbon metabolism
pbb01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AKN87_05095 (fadB)
00650 Butanoate metabolism
AKN87_05095 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AKN87_05095 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AKN87_05095 (fadB)
00310 Lysine degradation
AKN87_05095 (fadB)
00380 Tryptophan metabolism
AKN87_05095 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AKN87_05095 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AKN87_05095 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AKN87_05095 (fadB)
00930 Caprolactam degradation
AKN87_05095 (fadB)
Enzymes [BR:
pbb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AKN87_05095 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AKN87_05095 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AKN87_05095 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AKN87_05095 (fadB)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
SDH_sah
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AKX44546
LinkDB
All DBs
Position
complement(1047631..1049778)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALEDGIVELKFDLNGESVNKFNRQTLEELQAATSAIAADSSVKGVLVSS
GKDVFIVGADITEFADNFNRSEEELAQFTLEANQIFNAFEDLAVPTAVAINGIALGGGLE
MCMAADYRVLADGAKVGLPEVKLGIYPGFGGTVRMPRLIGADNAIEWIAAGKEGRAEEAL
KVGLVDVVVSQDQLKPAALDLLKRAIAGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGKAGPNYPAPVEAIKTMQKAANMGRDKALEVEAKGFAKLAKTSVAASLVGLFLNDQAL
KHKAKEYDKLASDVKMSAVLGAGIMGGGIAYQSALKGTPILMKDINEAGIETGLEEAAKL
FAKRVERKRLTPLKMAEALNRIRPTLSYGDFNTVDLVVEAVVENPKVKHAVLAEVEQNVS
ENTILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEHSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMERFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEADRLGQKNGKGFYAYETDKRGKP
KKVVDESIKDVLAPIVYENLELTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTEKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggcacttgaagatggcatcgttgagtta
aaatttgacctcaatggtgagtccgtaaacaagtttaaccgtcaaactttagaagaatta
caagcagccactagcgccatcgcggctgatagttcggttaaaggtgtattagttagcagt
ggtaaagacgtatttattgttggtgctgacattaccgagtttgccgataactttaaccgc
agcgaagaagagctggctcagttcactctagaagccaaccaaatctttaatgcctttgaa
gacttagctgtacctaccgcagttgccattaatggtattgccttaggcggtggtctagaa
atgtgtatggcggctgattaccgcgtactggctgatggcgccaaagtcggcttgccagaa
gttaagttaggtatctacccaggcttcggtggaactgtgcgtatgccgcgcctaattggt
gctgataacgccattgagtggatcgcagccggtaaagaaggccgtgctgaagaagcgctg
aaagttggtttagttgatgtggtcgtgagccaggatcagttaaagccagctgctttagac
ttacttaagcgtgctattgcaggcgagctagactataaagctaagcgtcagccgaagtta
gaaaagctaaaattaaatgccattgagcaaatgatggcgtttgaaaccgctaaaggtttt
gtggctggtaaagcaggccccaactacccagcgccagttgaagcgattaaaaccatgcaa
aaagcggccaacatgggccgtgataaagcattagaagtagaagctaaaggctttgctaaa
ttagctaaaacctcagtagcggctagcttagtgggtctgttccttaatgatcaggcactt
aagcacaaagcgaaagagtacgacaaactagcatccgacgtaaaaatgtctgcagtttta
ggtgctggcatcatgggtggcggtattgcttaccagtcagccctcaaaggtaccccaatt
ttgatgaaagacatcaatgaagcgggtatcgaaaccggtctagaagaagccgctaagtta
tttgctaagcgtgttgagcgtaagcgcttaactccactgaaaatggctgaggcattaaat
cgtattcgcccaaccttatcctacggtgactttaatactgtggatctggtggttgaagca
gtagttgaaaacccgaaagttaagcacgcagtgctggcagaagttgagcaaaatgttagc
gagaacactattctggcttctaacacctcaacaatctcaattaacctgctggcaaaagcg
ctgaagcgcccagaaaactttgtcggtatgcacttctttaacccagtgcacatgatgcca
ttggttgaagtgattcgtggtgagcactcctcagaagaagcggtagcaacgacagtagct
tacgctaagaaaatgggtaaaaacccaatcgtggttaatgactgcccaggcttcttagtt
aaccgcgtactcttcccttactttggtggtttcgccaagttagtcagcgctggtgtagat
tttgtccgcatcgataaaatcatggagcgttttggctggcctatggggcctgcgtacctg
atggacgtagtgggaattgataccggtcaccatggccgtgacgtaatggctgaaggtttc
ccagatcgtatgaaggacgagcgtcgttcagcggttgatgccttatacgaagctgatcgt
ttaggtcagaaaaacggtaaaggtttctacgcttacgaaacggataagcgtggcaagccg
aaaaaggtggtggatgagtcgattaaagacgtattagccccaattgtttacgaaaaccta
gagctaaccgacgaagacatcattaactggatgatgattcctctgtgcttagaaaccgta
cgctgcctagaagatggcattgttgaaaccgcagctgaagccgatatgggcttgatctac
ggtattggtttccctccattccgtggtggtgcgttacgttacattgatagcatcggtgta
gccgaatttgtggccttagctgacaagtatgcagatttaggaccgctataccatccaact
gaaaaacttcgtgaaatggctaaaaatggccagaagttcttcggttaa
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