Thiopseudomonas alkaliphila: AKN87_08645
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Entry
AKN87_08645 CDS
T04152
Symbol
rsmD
Name
(GenBank) 16S rRNA methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbb03009
]
AKN87_08645 (rsmD)
Enzymes [BR:
pbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
AKN87_08645 (rsmD)
Ribosome biogenesis [BR:
pbb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AKN87_08645 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
UPF0020
MTS
MethyltransfD12
PrmA
Methyltr_RsmB-F
N6_Mtase
Motif
Other DBs
NCBI-ProteinID:
AKX45147
LinkDB
All DBs
Position
complement(1791636..1792262)
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AA seq
208 aa
AA seq
DB search
MARTIKPAGKAKAKVFVGTGQLRIIGGQWRSRRLTFPEAQGLRPTPDRVRETLYNWLAPY
IEGARLLDPFVGSGALFLEGLSRGAASGLAFDLHPPAVTNVQQNLQVLGCTQAAVRLGNA
LQLLQQSPAQPFDIVLLDPPFHQNLLADACHLLEEQQWVTAAAWVYTESEQAPSQAGLPS
HWRLHREKHTGQVYYALWQRQPIDGEQS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggacaataaaaccagctggcaaagccaaagctaaggtctttgtggggactgga
cagttaagaattattggcgggcaatggcgttcacggcgtttaacttttccggaggcgcag
ggcttaagacctacccctgatcgggtgcgggaaacgctgtataactggctagcgccttat
attgaaggtgcacgtttacttgatccttttgtgggcagtggcgcgttatttcttgagggg
ctttctcgtggggctgccagtggtctagcctttgatttgcatccgccagcggtgactaat
gtgcagcaaaacttacaggttttaggttgcacccaggctgccgttcgcctagggaatgca
ttacaattgctgcagcagtcacctgcgcagccgtttgatattgtgctgctagatccgcca
tttcatcaaaacctgttggctgatgcctgtcatttactagaagagcagcaatgggtaacg
gctgctgcttgggtgtataccgaaagtgagcaagcgccttcgcaagcagggctgccgagt
cactggcgcttacatcgagaaaaacatacaggacaagtttattacgcactttggcaacgt
cagccaatagatggggagcaatcatga
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