Pseudomonas brassicacearum DF41: CD58_04330
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Entry
CD58_04330 CDS
T03174
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00330
Arginine and proline metabolism
pbc00480
Glutathione metabolism
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CD58_04330
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CD58_04330
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CD58_04330
Enzymes [BR:
pbc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CD58_04330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AHL32159
UniProt:
W8PED8
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All DBs
Position
complement(1004069..1005232)
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AA seq
387 aa
AA seq
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MSIQVEDYFARETFQKMKAFADKQETPFVVIDTAMISKAYDDLRAGFDFAKVYYAVKANP
AVEIIDLLKDKGSNFDIASIYELDKVMSRGVGPDQISYGNTIKKSRDIRYFYEKGVRLYA
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccaggtcgaagattatttcgcgcgcgaaaccttccagaaaatgaaagcgttc
gccgacaagcaggaaaccccgttcgtggtgatcgacaccgcgatgatctccaaggcctat
gacgacctgcgcgccggtttcgactttgccaaggtctactacgccgtcaaggccaacccg
gcggtcgaaatcatcgacctgctcaaggacaaaggctcgaacttcgacatcgcctcgatc
tacgagctggataaagtcatgagccgtggcgttggcccggaccagatcagctacggcaac
accatcaagaaatcccgggacatccgctacttctacgagaagggcgtgcgcctgtatgcc
accgactccgaagccgacctgcgcaacatcgccaaggccgcgccgggttcgaaagtctat
gtgcgcatcctcaccgaaggctcgaccaccgctgactggccgttgtcgcgcaagttcggc
tgccagaccgacatggccatggacctgctgatcctggcccgcgacctgggcctggtgccg
tacggcatttccttccacgtcggctcgcaacagcgcgacatcagcgtctgggacgcggcc
attgccaaggtcaaggtcatcttcgagcgcctgaaagaagaagacggcatcgtcctgaag
ctgatcaacatgggcggcggcttcccggccaactacatcacccgcaccaacagcctggaa
acctacgccgaggaaatcatccgtttcctcaaggaagacttcggcgacgacctgccggaa
atcatcctggagccgggccgttcgttgatcgccaacgccggcatcctggtcagcgaagtg
gtgctggtggcgcgtaagtcccgtaccgccgtcgagcgttgggtgtacacggacgtgggc
aagttctccggtctgatcgaaaccatggacgaagccatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaagtggtcatcgccggccctacctgcgacagcgccgacatc
atgtacgagaactacaagtacggcttgccgctgaacctggccatcggtgaccgtctgtac
tggctgtcgaccggtgcctacaccaccagctacagcgccgtggaattcaacggtttcccg
cccctgaagtcgttctacgtgtga
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