Pseudomonas brassicacearum DF41: CD58_17500
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Entry
CD58_17500 CDS
T03174
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00250
Alanine, aspartate and glutamate metabolism
pbc00310
Lysine degradation
pbc00350
Tyrosine metabolism
pbc00650
Butanoate metabolism
pbc00760
Nicotinate and nicotinamide metabolism
pbc01100
Metabolic pathways
pbc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CD58_17500 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CD58_17500 (gabD)
00310 Lysine degradation
CD58_17500 (gabD)
00350 Tyrosine metabolism
CD58_17500 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CD58_17500 (gabD)
Enzymes [BR:
pbc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CD58_17500 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CD58_17500 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CD58_17500 (gabD)
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Motif
Pfam:
Aldedh
PNP_UDP_1
DUF2062
Motif
Other DBs
NCBI-ProteinID:
AHL34584
UniProt:
W8PKR2
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All DBs
Position
complement(4004025..4005494)
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AA seq
489 aa
AA seq
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MKHLLKDPTLWRTGAYIGGEWLDETPHGRYALRNPVDQTVLIELPRCRETEVRRAIDAAH
EAFGPWRRLTAKRRGEVLRRWYELMVEHREDIATLITLEEGKPLDEARGEVDYAASFVRW
FSEEATRVRGDVIPGVKDTQRIVALREPIGVCAAITPWNFPAAMITRKAAPALAAGCTMV
VKPASQTPMTALALAELAQRAGVPAGVFSVITGNDTRDIAGELTANPLVRKLTFTGSTEV
GRLLLAQAAQTVKKCSMELGGNAPFIVFDDADLDAAADGVMLAKFRNSGQSCIGANRVLV
QAGVYDALTERIVERVARLKVGNGLEPGVQVGPMIDEAAVQKSQAFVEDALAQGARLLSG
GTRHAIGGCFFQPTVLADVTHGMRIAREEIFGPVMPLLRFDTDDEAITMANDSEYGLAAY
LYSRDAARIWRTAARIESGMVGINCGLISNEVAPFGGVKQSGLGREGSHLGIDEFLEVKY
LCWDGLESV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcatttactaaaagatccaaccctgtggcgtacgggcgcctacatcggtggcgaa
tggctggacgagacgccgcacggccggtacgcgctacgtaatccagtcgatcaaacggta
ctcatcgagctgccgcgctgtcgcgaaaccgaagtgcgccgtgccatcgatgccgcgcat
gaggcctttggcccatggcgtcgcctgacggctaaacgccgtggcgaggtgttgcgccgt
tggtatgagctgatggtggaacatcgcgaagatatcgccacgctgatcaccctggaggag
ggtaagccactggacgaggcccgtggtgaggtcgattacgccgcctccttcgtgcgatgg
ttttcggaagaggccacgcgggtgcgcggtgatgtgatccccggtgtgaaagacacccag
cgtatcgttgcattgcgcgagcccatcggggtctgtgccgccattaccccctggaacttc
ccggcggccatgatcacccgcaaggcggctccggcgcttgcagcgggctgcacgatggtg
gtgaaaccggcaagccagacaccgatgaccgcgctcgcgctcgccgaactggcccaacgc
gccggagtgccggccggtgtcttcagcgtgatcaccggtaatgacacccgagacatcgcg
ggcgaactcacggccaacccgttggtgcgcaagctcacgttcacggggtctacggaagtg
ggccggctgctgttggcgcaagcggcgcagaccgtcaagaagtgctcgatggagttgggc
ggcaacgctcccttcattgtcttcgatgatgctgaccttgatgccgccgccgacggtgtg
atgttggccaagtttcgcaacagcggccagtcctgtatcggcgcgaatcgggtgttggtg
caagccggggtttatgatgcgctgaccgagcgcattgtcgagcgcgtggcacggcttaaa
gtggggaatggcctggaacctggcgtgcaggtggggccaatgatcgatgaggccgcggtg
cagaaatctcaagcgtttgtagaggatgccctggcacaaggtgctcgactgttgtccgga
ggtacccgtcatgcaatcggcgggtgtttcttccagcccacggtactggccgatgtgacg
catgggatgcggattgcccgggaggagatcttcggcccggtcatgccactgttgcgtttc
gacacggatgacgaagcgatcacgatggccaacgacagcgagtatggcctagccgcctac
ttgtacagccgtgatgcggcgcgcatctggcgtaccgctgcacgcattgaatcaggcatg
gtcgggatcaactgcggtttgatatccaatgaagtcgccccctttggtggggtgaagcag
agcggtcttggacgagaaggatcccaccttgggatcgacgagttccttgaggtgaaatac
ctctgctgggatggcctggaaagcgtctga
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