Prionailurus bengalensis (leopard cat): 122486070
Help
Entry
122486070 CDS
T07574
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04721
Synaptic vesicle cycle
pbg04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
122486070 (SLC6A4)
04721 Synaptic vesicle cycle
122486070 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbg02000
]
122486070 (SLC6A4)
Transporters [BR:
pbg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122486070 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
122486070
NCBI-ProteinID:
XP_043441485
LinkDB
All DBs
Position
E1:16548918..16595371
Genome browser
AA seq
630 aa
AA seq
DB search
MDTTPLNSQKELSACKDKDDCQENGVLQKGVPVPEDKVESGQISNGYSAVPSPGAEDDTQ
HSIPAATTSLVAEAHRGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHILQIH
RSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGILFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSGVNCMTSFVSGFVIFTVLGYMAEMRNEEVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVIDEFPHIWSERREWFVLGVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWKIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYITYRLIIT
PGTFKERIIKGITPETPTEIPYGDVHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggataccacgcccttaaattcccagaaggagctgtcagcctgtaaggataaagacgat
tgtcaggaaaatggagttctacagaagggtgtgcctgtccccgaggataaggtggagtct
ggccaaatctccaatgggtactcagcagttccaagccctggtgcagaagatgacactcag
cactccattccggctgccaccacctccctagtggctgaggctcatcgaggggaacgggag
acctggggcaagaagatggatttcctcctctcggtcattggctatgccgtggacctgggc
aacgtctggcgctttccttacatatgttaccagaatggagggggagcgttcctcctaccc
tacaccatcatggctgtttttggggggatcccgctcttctacatggagctcgcactaggc
caataccaccgaaatggatgcatttcgatatggaggaaaatctgcccaattttcaaaggg
atcgggtatgccatctgcatcattgccttctacatcgcttcctactacaacaccatcatg
gcctgggcactctactacctcatctcctccttcacggaccagctgccctggaccagctgc
aagaactcttggaacactggcaactgcaccaactacttctccgaggacaatgtcacctgg
acgctccactcaacatcccctgcagaagaattttacacgcgccacatcctgcagatccat
cggtctaagggacttcaggacctggggggcatcagctggcagctcgctctctgcatcatg
ctgatcttcactgtgatctacttcagcatctggaaaggtgtcaaaacgtctggcaaggtg
gtgtgggtgacagccaccttcccttacatcatcctttcagttctgctggtaagaggcgcc
accctccccggagcctggaggggtattctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgctgccgcacagatcttcttctctcttggtcctggc
tttggggtcttactggctttcgctagctacaacaaattcaacaacaactgttaccaagac
gccctggtgaccagtggggtgaactgcatgacgagcttcgtttccggatttgtcatcttc
acggtgctcgggtatatggcagagatgaggaacgaagaggtgtctgaggtggctaaagat
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccagcgtcc
acattctttgccatcatcttcttcctgatgctaatcacactgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgatagacgagtttccgcacatctggtccgag
cgccgagagtggtttgtgcttggtgtggtcattacctgcttcttcggatctctggtcacc
ctgacttttggaggggcgtacgtggtaaagctgctggaggaatatgccacaggccctgca
gtgctcaccgttgtacttatagaagcagttgctgtctattggttttacggcatcactcag
ttctgcagtgatgtgaaagaaatgcttggcttcagccctggatggttttggaagatctgc
tgggtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagccca
ccacagctacgacttttccaatataattatcctcagtggagtatcatcctgggttactgc
ataggaacctcgtcttttatctgcatccccacatatataacgtatcggctgatcatcact
ccagggacatttaaagagcgtatcattaaaggtatcactcctgaaacaccaacagaaatt
ccctatggggacgtccacttgaacgccatataa
DBGET
integrated database retrieval system
