Prevotella bivia: QP022_06820
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Entry
QP022_06820 CDS
T09089
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbiv
Prevotella bivia
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbiv03009
]
QP022_06820 (rimO)
Enzymes [BR:
pbiv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QP022_06820 (rimO)
Ribosome biogenesis [BR:
pbiv03009
]
Prokaryotic type
ribosomal protein modification factors
QP022_06820 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WIL18928
LinkDB
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Position
2:complement(284866..286164)
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AA seq
432 aa
AA seq
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MNKNQIDIITMGCSKNLVDSELLMKQFEANGFECTHDTEQPEGEIAVINTCGFIETAKEE
SINTILEFVNRKEKGQLNKLFVMGCLSQRYKDELEKEIPEVDKFYGKFNYKQLLTDLGKA
DVTSCNGVRHLTTPRHYAYIKIAEGCDRHCAYCAIPLITGKHRSRKMEDILQEVEQLVAQ
GVKEFQVIEQELTYYGVDLDGKHHITELISRMADIKGVEWIRLHYAYPNQFPFDLLDVIA
QKPNVCKYLDIAFQHISDHMLDRMHRHVSKQETINLIKEIRSRVPSIHLRTTLLVGFPGE
TDEDFEELKDFVREVRFERMGAFAYSREEGTYSAEHYEDDVPEEVKQQRLDELMAIQQEI
STELEETKIGQTFKVIIDREEGDYYIGRTEFCSPDVDPEVLISIGEVPLRVGEFYNVYIT
DSDEFDLYGEVR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatcaaatagacataataacgatggggtgttcgaaaaaccttgtcgactcg
gaacttcttatgaaacagtttgaggcgaatggtttcgaatgtactcacgatacagaacag
ccagagggcgaaattgcagttatcaatacatgtggctttattgaaacagcaaaagaagaa
agtattaacaccatattagagtttgttaataggaaagaaaaagggcagctaaataagctg
tttgttatgggatgtctttctcaacgttataaagacgaacttgagaaggaaattccagaa
gtagataagttttatggtaaattcaactataaacagctattaaccgatcttggtaaagct
gatgtaacttcatgtaatggtgttcgtcatcttactactccccgccattatgcttatata
aagattgcagaaggttgtgatagacattgtgcttattgtgctattccattgattacagga
aagcatcgctctcgtaagatggaagatattctgcaagaagtggagcagcttgtggcacaa
ggcgtaaaggagttccaagttatcgaacaagagcttacctattatggtgtagatcttgat
ggaaaacaccatattacagagttgatctctcgaatggctgatattaagggggtggaatgg
attcgtcttcactatgcttatcctaatcagttcccatttgatttgctagatgttatagct
caaaagcctaatgtatgtaagtatttggatattgcttttcagcatatttctgaccacatg
ttggatagaatgcatcgccatgtaagtaagcaggaaacaattaatttgattaaagaaata
cgttctcgtgttcctagtattcatctgcgtaccaccttgttagtaggctttcctggagaa
acagatgaggattttgaagaacttaaggactttgttcgtgaggttcgttttgaacgtatg
ggcgcctttgcttattctcgtgaggaaggtacttatagtgcagaacattatgaggatgat
gtgccagaggaagttaagcaacaacgtttagatgagttgatggctattcagcaagaaata
tctactgagcttgaagagactaaaattgggcaaacctttaaagttataattgatcgtgag
gaaggagattactatattggacgaacagagttttgttcgccagatgttgatcctgaggtc
ttaataagtataggagaagtacctttgcgtgtaggggaattctataatgtgtatattacc
gactccgatgagttcgacctttatggtgaagtaagataa
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