Paenibacillus baekrokdamisoli: Back11_21460
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Entry
Back11_21460 CDS
T06671
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbk
Paenibacillus baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbk03009
]
Back11_21460 (rimO)
Enzymes [BR:
pbk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Back11_21460 (rimO)
Ribosome biogenesis [BR:
pbk03009
]
Prokaryotic type
ribosomal protein modification factors
Back11_21460 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBH20801
UniProt:
A0A3G9J4R5
LinkDB
All DBs
Position
complement(2357081..2358409)
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AA seq
442 aa
AA seq
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MTERVKVVTLGCEKNLVDSEIMSGLINERGYQLVDQADDATVIIVNTCGFIDAAKEESVN
TILDMAEFKQTGRLKALIVSGCLTQRYKKQLMEEMPEIDGIVGTGDFHHINDIVDEALRG
KKPVKVGNPVFDYDQKLPRLVTTPRYTAYVKIAEGCDNACTFCSIPIMRGNFRSRSIESI
IAEVQMLADQGVKEVSLIAQDSTNYGTDLYDKFMLPELLNRVSEVEGIAWVRLHYAYPGF
FTDELIETIATNSKVCNYIDMPLQHSEDSILKRMRRPGRQRDTRELVAKIRASIPDVALR
TSIIVGFPGETDEDFERLCDFVKEMKFDRLGVFTYSNEEDTPAVRLPNQVPDDVKEWRSN
TLMEIQREVSKYNSGKHIGSEIDVLVERYDGRSDVYIGRSPYDAPEIDGEVFISNCTAGI
GEIQRVRITHAFEFDMSGEGLA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacgagtaaaagttgtaacattaggctgtgagaaaaaccttgttgattcggag
attatgtcgggtcttattaatgaacgtggctaccagttagtcgatcaggcggatgacgct
acagttatcattgtgaatacatgtggttttattgatgctgcaaaagaggaatctgtgaat
accatattggatatggcagagtttaagcagaccggaagactcaaagcactaattgtgtcg
ggctgtttaacgcagcgttacaagaaacaactaatggaagagatgcccgagatcgatgga
attgtaggtacgggtgactttcatcatattaatgacatcgtcgatgaagcacttcgcggc
aagaaaccggtcaaggttgggaacccggtatttgactatgatcagaagctgcctcgtctt
gtaacgacgccgcgttacaccgcttatgtcaaaatcgcagaaggctgtgataatgcttgt
acattctgttcgattccgattatgcgcggtaatttccgtagtcgttctatagaatcgatt
atcgctgaagtacaaatgctcgctgatcaaggcgtcaaggaagttagcctaattgctcag
gattcaaccaattacggaacggatttgtacgataagtttatgcttccagagctgctcaat
cgagtgagtgaagtagaaggtatcgcatgggtaagattacattatgcatacccaggcttt
ttcacagatgagctgattgaaaccatcgcaaccaattctaaggtctgcaattatattgac
atgccgcttcagcatagtgaagactcaatcttgaagcgtatgcgtcgtccaggtcgccaa
cgggatacgagggaactagttgccaagattcgcgcaagcatacctgacgtagcgctaaga
acgtcaattattgtaggttttcctggtgaaaccgatgaggattttgagcggttgtgcgac
tttgttaaagaaatgaagtttgatcgtctgggtgtgtttacgtattccaatgaagaagat
acaccggcggtacgtcttcctaaccaagttccagacgatgtgaaagaatggcgttccaac
acattaatggagattcaacgcgaagtatccaagtataatagtggcaaacatatcggtagt
gaaatcgatgtgcttgttgagcgttatgatggaagaagcgatgtctacatcggtcgttcc
ccttatgatgctcctgagatcgacggggaagtctttatatcaaactgtacggctggtatc
ggcgaaattcaaagagtgcggataacgcatgccttcgagtttgatatgtccggggagggg
ctagcgtga
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