Paludisphaera borealis: BSF38_00990
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Entry
BSF38_00990 CDS
T04622
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbor
Paludisphaera borealis
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbor03009
]
BSF38_00990 (rimO)
Enzymes [BR:
pbor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BSF38_00990 (rimO)
Ribosome biogenesis [BR:
pbor03009
]
Prokaryotic type
ribosomal protein modification factors
BSF38_00990 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
APW59563
UniProt:
A0A1U7CL05
LinkDB
All DBs
Position
1272928..1274376
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AA seq
482 aa
AA seq
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MTSESSPESPEVRGTISFVSLGCSKNLVDSERMLGLLAQDGYALVPEGQSSDLVIVNTCG
FIDAARKESCGVIEEMLERKRDGRVKGVIVAGCLAERQKDQLLDEFPDVDQVVGVFGREQ
IVQVSNRILGGLHEQRTLFRPAPVDAQDDRARLRITPRHLAYLKVSEGCDRLCTFCAIPY
MRGKHVTKPIERVVEEARELARDGVRELILVAQDMTYYGVDLYGRPRLAELLRELDQIEE
LDWIRILYNYPNYFTEELYEVLGSSKRIVPYLDMPLQHINDRMLKVMNRRHTRAETEAII
NRLRATMPGLVLRTTFIVGFPGETDAEFEEMADFVAATRFERLGVFTYSLEPDTPAAKLP
NQLPDDLKEARRERIMTIQQPIAEEFNRSLVGRTLDVLIDGRAPGQDDVWIGRTFADAPD
VDGVTLIRDPGLQAGDIVPCEILETQGYDLVARSLALPARRKRARPRARKRPTSSLTILD
GM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagaaagttcgcccgaaagccccgaagttcgagggacgatctcgttcgtcagc
ctcggctgttccaagaacctcgtcgactccgagcggatgctcgggctgttggcccaggac
ggctacgcgctggtccccgagggacagtcgtccgacctggtgatcgtcaacacctgcggg
ttcatcgacgccgcgcggaaggaatcgtgcggggtgatcgaggagatgctcgaacgcaag
cgcgacggtcgcgtcaagggcgtgatcgtcgccggctgcctggccgagcgccagaaagac
cagttgctcgacgagtttccggacgtcgaccaggtggtcggcgtctttggccgcgagcag
atcgtccaggtgtccaaccgcatcctcggcggtctccacgagcagcggacgctgttccgc
cctgccccggtcgacgcccaggacgaccgcgcccggctccggatcacgccccgccacctg
gcgtatctaaaggtctcggaaggctgcgaccggctctgcaccttctgcgcgatcccctac
atgcggggcaagcacgtcacgaagccgatcgagcgagtcgtcgaggaggcccgcgagctg
gcccgcgacggcgttcgcgagttgatcctggttgcgcaggacatgacgtattacggcgtc
gacctttacggtcggccgcgcctggccgagctgctccgcgagctggatcagatcgaagag
ttggactggattcgcatcctctacaactacccgaactatttcaccgaagagctttacgag
gtccttgggagttccaagcggatcgtcccgtacctcgacatgcccttgcagcacatcaac
gaccggatgctcaaggttatgaaccgccgtcacacccgcgccgagaccgaggcgatcatc
aaccgcctgcgggcgacgatgccggggctcgtgctgcggacgacgttcatcgtcggcttt
ccgggcgagaccgacgccgagttcgaagagatggccgacttcgtggccgcgacccggttc
gagcggctgggggtcttcacctactcgctcgaacccgacacgccggccgccaagctgccg
aaccagcttcccgacgacctcaaggaagcgcgtcgcgagcggatcatgacgatccagcag
ccgatcgccgaggagttcaaccgcagcctggtgggtcgcacgctcgacgtcttgattgac
ggccgggcgcccggtcaggacgacgtctggatcggccggaccttcgccgacgctcccgac
gtcgacggcgtcactttgatccgcgaccccgggctccaggccggcgacatcgtcccttgt
gaaatcctcgagacccagggctacgacctcgtcgcccgctcgctggccctgcccgcccgg
cggaagcgagcccgtccccgggctcgaaagcggccgacctcgtcgctgacgatcctcgat
gggatgtga
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