Parvularcula bermudensis: PB2503_11209
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Entry
PB2503_11209 CDS
T01298
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00900
Terpenoid backbone biosynthesis
pbr01100
Metabolic pathways
pbr01110
Biosynthesis of secondary metabolites
Module
pbr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PB2503_11209
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pbr01006
]
PB2503_11209
Enzymes [BR:
pbr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PB2503_11209
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PB2503_11209
2.5.1.29 geranylgeranyl diphosphate synthase
PB2503_11209
Prenyltransferases [BR:
pbr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PB2503_11209
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Zincin_2
Motif
Other DBs
NCBI-ProteinID:
ADM10289
UniProt:
E0TIH0
LinkDB
All DBs
Position
complement(2246494..2247444)
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AA seq
316 aa
AA seq
DB search
MVGHQSSDRQDHLAEAAETIEAEALRLKGVVESRLADLIPAVGPPAEAARHSLLAPGKRI
RAVLTLLAARECGGSLERALDTACAVEMIHTASLVIDDLPAMDDADLRRGRPTCHRAFGE
STAILAAIGLLNGAYGVVMAAEPLSAAEKTKIASILSSAVGWRGLVQGQALDLNPGTTSL
ETIQDGKTGVLFEAAVLAGEQTAGWVSEKSVALAAFATALGRAYQALDDLLDLIDSVSAL
KSTGRDDGKRTALSEGGESEDTVSKAVETARHHLDEARAALPETSRLSAYLTLIEGHFQS
VLSKASPAMTAAVSSL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtggttgggcaccagtcttctgatcgacaggaccaccttgccgaggcggcagagacaatc
gaggcggaggcccttcgcctgaaaggggtggtcgagtcgcgacttgccgacctgatcccc
gcggtgggtcctcctgctgaggcggctcgtcacagtttgttggcgccgggaaagcggatc
cgcgccgttctcactttattggctgcacgggaatgcggcggttccctcgaacgggcgttg
gatacggcatgcgccgttgaaatgatccacacggcaagtctggtgatcgatgatctgccc
gccatggacgatgcggatctgcgccgcggccgcccgacctgtcatcgtgcttttggcgaa
agtaccgcgatcctcgcggccattggcctccttaacggggcctatggtgtcgtgatggcc
gcagaacctctgagcgcggcggagaaaaccaagatcgcctcaattctctcatcggcggtg
gggtggcggggattggtccagggccaggcgctcgatctcaatccgggcaccacctccctc
gagacgatccaggacggcaagaccggcgtcctgttcgaggccgccgttcttgcgggagag
cagaccgccggatgggtttcagagaaaagcgtggcccttgcggccttcgcgaccgccctc
ggccgcgcctaccaggcgctcgacgatcttctcgacctgatcgattccgtctccgccctc
aaatcgacagggcgcgatgacggcaaacgcaccgccctgtcggagggcggcgagagtgag
gataccgtgtccaaagcagtggagacggcgcggcatcatctggacgaggcgcgcgccgcc
ctgccggaaacatcccggctgtccgcctatctcaccctgatcgaaggtcattttcagtcg
gttctgtcaaaggcgtcccccgcgatgacagcagcggtcagctcgctttaa
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