Parvularcula bermudensis: PB2503_13064
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Entry
PB2503_13064 CDS
T01298
Name
(GenBank) putative geranyltranstransferase (farnesyl-diphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00900
Terpenoid backbone biosynthesis
pbr01100
Metabolic pathways
pbr01110
Biosynthesis of secondary metabolites
Module
pbr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PB2503_13064
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pbr01006
]
PB2503_13064
Enzymes [BR:
pbr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PB2503_13064
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PB2503_13064
Prenyltransferases [BR:
pbr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PB2503_13064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
3D
Motif
Other DBs
NCBI-ProteinID:
ADM10650
UniProt:
E0TG79
LinkDB
All DBs
Position
complement(2673354..2674244)
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AA seq
296 aa
AA seq
DB search
MSDTLSDYLITRANLVTKSLENRLVINRTESPALGRLRAAMAHGALGGGKRLRPFLVLEA
ASIFGADDEAALPAATAIEMVHCYSLIHDDLPAMDDADTRRGRPSVHKAYDEAIAILAGD
GLLTDAFALLTEEGTYTAPTACRLVRELALAAGSGGMVGGQMMDLYPDGGDEAAIVGIQR
RKTGALIEAAAVMGAIVGAAAPSDEAALRQYAAAVGEAFQVVDDILDETASSAELGKPAG
VDGAAGKATFVSLLGLAGARDRVSALTAAALAALAGLGPRADRLRAVAGQLASRST
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataccctttccgattatctcataacccgtgcgaacttggttaccaaaagccta
gaaaatcggcttgttatcaatcggacggagtcgccggccctggggcgcctgcgcgcggcg
atggcccatggggccttgggcgggggcaagcgcctcagaccctttctcgtcctcgaagcg
gcgtcgattttcggcgcggacgatgaggcggcgctgcccgcggcaacggcgatcgaaatg
gtgcattgctattcgctgattcacgacgaccttcccgccatggacgatgcggacacccgc
cggggacggcccagtgtccataaggcctatgacgaggccatcgctatcctcgccggtgat
gggctgctcaccgatgcctttgcgcttctcaccgaagaggggacatatacggcgccgacg
gcctgccgccttgttcgagagctggccctggcggcgggctcaggggggatggttggcggc
cagatgatggatctttatcccgatggcggcgatgaagcggccatagtggggatccagcgc
cgcaagaccggggcgctgattgaggccgctgcggtcatgggggcgatcgtcggggctgcg
gcgccgtcggatgaagccgcattgcgccagtatgctgcggcggtgggggaagcgtttcag
gtcgtcgacgatattctcgacgagaccgcgtcgagcgccgaattgggtaaacctgcgggc
gttgatggcgccgcgggcaaggcgacttttgtgtctcttctcggtcttgccggggcgcgg
gaccgggtttcggcgcttacggcggctgccctcgccgctctggccggcttggggccgcgg
gccgaccgccttcgggccgtggcaggccaattggcgtcccgatcgacatga
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