Pectobacterium brasiliense: B5S52_16350
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Entry
B5S52_16350 CDS
T06364
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00730
Thiamine metabolism
pbra01100
Metabolic pathways
pbra01240
Biosynthesis of cofactors
pbra04122
Sulfur relay system
Module
pbra_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
B5S52_16350
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
B5S52_16350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbra03016
]
B5S52_16350
Enzymes [BR:
pbra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
B5S52_16350
Transfer RNA biogenesis [BR:
pbra03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
B5S52_16350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ARA77369
UniProt:
A0A086F095
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All DBs
Position
complement(3649026..3650474)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
EAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALALYRERLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEESHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRAPDEQD
DKPLELDQVEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
gaggcaattcgtgatgcgctgacaagaattcccggcattcaccatattctggaagttgaa
gatcacgcctataccgacgtgcacaatatctttgaacaagcgctggcgttgtaccgtgag
cggttggaaggcaagacgttttgtgtgcgagtgaaacgccgcggtaagcatgaattcagc
tcacaggacgtagaacgctacgtcggcggtggtttgaaccagcacattgaaacggcgcga
gtcaacctcactgcaccgcaggtcaccgtgcatctggaaatcgagcaggaccgtctgctg
ctgattaaggggcgctatgaaggtatcggcggtttcccgatcggtacgcaagaagatgtg
ctgtcactgatttccggtggtttcgattccggcgtatccagctatatgttgatgcgtcgc
ggatgtcgtgtgcattactgcttcttcaaccttggcggtgcagcacatgagattggggtg
aaacaggtcgcacactatctgtggaatcgctttggtagctcacatcgggtgcgctttatt
gctatcgacttcgatcctgtcgtgggtgaaattctcgagaaggtcgacgacggccaaatg
ggcgtcgtgctgaagcgcatgatggtgcgtgcggcctccaaagttgctgaacgttacggt
gttcaggcgctggtgacgggtgaagcgttagggcaggtctctagccagacgctgaccaac
ctgcgtttgatcgataatgcctccgacacgctgattctgcgtccgctgatttctcatgat
aaagaacacattatcaaacaggctcgcgaactggggacggaggatttcgccaaaacgatg
ccggaatattgtggtgtgatctcgaaaagcccgacggtgaaggcggtgaaagcgaagatt
gaggccgaagaaagccacttcgattttgctatcctggatcgtgtggtgagtgaagcccgg
aatattgatatccgtgagatcgccgaacagactaagcaagacgtggttgaagtggaaacg
gtcgcgtcatttgcgccaaccgacgtgctgctggatatccgtgcgccggatgagcaggac
gataagccgcttgaacttgatcaggtcgaaatcaaatccttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagcaaaacctatctgctctactgtgagcgtggcgtg
atgagccgcttgcaggcgctatacctgcgtgagcaaggttttaccaatgtgaaggtatac
cgtccgtaa
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