Pectobacterium brasiliense: B5S52_21900
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Entry
B5S52_21900 CDS
T06364
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra03030
DNA replication
pbra03410
Base excision repair
pbra03420
Nucleotide excision repair
pbra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5S52_21900
03410 Base excision repair
B5S52_21900
03420 Nucleotide excision repair
B5S52_21900
03440 Homologous recombination
B5S52_21900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbra03032
]
B5S52_21900
03400 DNA repair and recombination proteins [BR:
pbra03400
]
B5S52_21900
Enzymes [BR:
pbra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5S52_21900
DNA replication proteins [BR:
pbra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B5S52_21900
DNA repair and recombination proteins [BR:
pbra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B5S52_21900
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5S52_21900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ARA78376
LinkDB
All DBs
Position
complement(4883705..4886494)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHKMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKAGKSVLISTGDKDMAQLVTPSVTLINTMNNSILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQHK
DVAYLSYQLATIKTDVELELSCDQLTVNELDVDELHRLFSRYEFKRWLSDVESGTWMQGK
KSSQPVQAVSNAVVEQVAEEDNAPTLSADGYVTILDEKTLLDWVERLKQAEVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPEQLDRTKVLALFKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLSHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQKLWGRLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPAILAEHSKELTIRLAELETQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DKGLLNAFANGLDIHRATASEVFGIALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDTPKVKMIMQVHDELVFEIHDSVIEESISK
IKALMEGCMQLNVPLQVDIGTGMNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaatcctttaatactggtagacggttcatcctatttgtatcgt
gcttatcacgctttcccaccgttaacaaacagcgcgggagaagccactggtgcaatgtat
ggcgtactgaatatgctacgcagtttgctgttgcaatatcagcccagccacgttgccgtc
gtttttgatgcgaaagggaaaacgtttcgcgatgaactgttcgaaaattataaggctcac
cgcccaccgatgccggaggatctacgcgagcaaatagagcctctgcataagatggtgaaa
gcaatggggctgccgcttctggcggtttccggcgtagaagcggacgatgtgattggtacg
ctcgccgttcaggctgaaaaagcgggtaagtcggtgctgattagtaccggcgataaagat
atggcgcagttggtgacgccgagtgtgacgctcattaataccatgaataactcgattctt
ggcccacaggaagtgtgtgataagtacggtattcctcctgagctgattatcgatttcctt
gcgctgatgggggatgcatcagataacattcccggtgtacctggcgtgggtgaaaaaacg
gctcaagcgctattgcaagggctcggcgggctggattcgctctatgccaatcttgataag
atcgctggactttccttccgtggtgcgaaaaccatggcgccgaagctggaacagcacaaa
gacgtggcctacctctcttatcagctagccaccattaaaacggatgtcgagctggagctt
agctgcgatcagctcaccgttaacgagctggatgtggatgaactgcatcgtctcttttcc
cgttatgaatttaaacgctggttatcagatgttgaatcaggcacttggatgcagggtaaa
aagagcagccagcctgttcaggctgtcagtaacgcggtggttgagcaagttgctgaagaa
gataacgcacctacactttctgctgacggttatgtcacgattcttgatgaaaaaacgctg
ctcgattgggttgagcgtttaaaacaggctgaagttttcgcttttgatacggaaaccgac
gggctggatacactcaccgctaatctgattgggctgtcattcgccattaagccgggtgaa
gccgcttatttgccgctggcgcatgactatctggatgcgccggaacagttggatcgcacc
aaggtgttggccttgttcaaaccgctgctggaagatgagaagctgcttaagattggtcag
aatctcaaatttgataaaggcgtgatgcagcggtatgacatcgatttacgcggcatcgcg
tttgataccatgctggaatcttatgtgctcgacagcgtggcgggccgccacgatatggat
agcctggccgaacgctatctgagccacaaaaccattacctttgaagagatcgcgggtaag
ggaaaaaatcagctgacgtttaatcagattgcactggaacaggctgggccttatgcagcc
gaagatgcggacgttacgctgcatctgcaccagaagctttgggggagactccagccgcat
gccgatctgtgccaggttttccagactattgatatgccgctggtgccggttttatcccgc
atcgagcgtacaggtgtgctgatcgatcctgctattctcgcggagcactcaaaagagctc
acaatccgtctggcagagctggaaacacaagcctatgagctggcgggcgaagagttcaat
ctctcatcgaccaagcagctacagggtattttgtatgaaaaacaaaagctgccgattctg
aagaaaacgccaaaaggcgcaccgtcaaccaatgaggaagtgctggctgaactggcgctg
gattaccctctgccgaagttgatcctggaatatcgtgggttggccaagctgaaatctact
tacaccgataagctgccgctgatgatcaatccggcgacgaagcgtgttcatacgtcttat
catcaggctgttaccgcgaccgggcgtttgtcttccagcgatccgaacctgcaaaatatc
ccggtgcgtaatgacgaagggcgccgtattcgtcaggcattcattgcaccgaagggctac
agcattgttgcggcggactactcgcaaatcgaactgcgtatcatggcgcacttatccggt
gataaagggctgttgaacgcgtttgctaacgggttggatatccaccgggcaacggcgtca
gaagtatttggcatcgcattggataaggtgacatcggaacagcgtcgcagtgcgaaagcg
atcaactttggtctgatctacggcatgagcgcatttggtctgtcgcgccagttgaatatt
ccccgtagcgaatcgcagaaatacatgaacctgtattttgagcgttacccgggtgtgcag
gattacatggagcggacgcgccaacaggccgcagagcatggctatgtgtccacgcttgac
ggtcgccgtctctatctgcctgatatccattctcgtaatgcgatggcgcgtaaaggcgca
gaacgtgcggcgattaacgccccaatgcagggcaccgctgctgatattattaagaaagca
atgatcgcgattgacgattggctacagaaagacacgccgaaggtgaagatgatcatgcag
gttcacgatgaattggttttcgagattcatgattcggttattgaagaatccattagtaaa
atcaaagcattaatggaaggttgtatgcaattgaatgttccgttacaggttgacatcggt
acgggcatgaactgggatgaagcacattaa
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