Pseudonocardia broussonetiae: HOP40_17125
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Entry
HOP40_17125 CDS
T07210
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbro
Pseudonocardia broussonetiae
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbro03009
]
HOP40_17125 (rimO)
Enzymes [BR:
pbro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HOP40_17125 (rimO)
Ribosome biogenesis [BR:
pbro03009
]
Prokaryotic type
ribosomal protein modification factors
HOP40_17125 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QJY47317
UniProt:
A0A6M6JK45
LinkDB
All DBs
Position
3466282..3467745
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AA seq
487 aa
AA seq
DB search
MSTPRRAALLTLGCARNEVDSEEIAGRLTDSGWELVDADDGADVILVNTCGFVEQAKKDS
IDTLLAASDSAQESGAKVVAVGCLAERYGKELADQLPEADAVLGFDAYPDLAERLGDVLG
GHAPAAHVPVDRRTLLPISPVERPAASADVAVPGHAWVPNLARTRLTEGPVANLKLASGC
DRRCTFCAIPSFRGSFVSRPADDVVAEAAWLGMEGVRELYLVSENSTSYGKDLPGGTRAL
VRLLPRLTQVPGIDRVRVSYLQPAEMRPDLIEVIASTPGVAPYFDLSFQHAAPTLLRRMR
RFGSRADFLDLCARIRALAPEAGIRSNFIVGFPGETDEEFAELEAFLSEARLDAVGLFGY
SDEDGTEALSLPDKVPAEVITERLARLSSLVEELMSQRAEERIGTEVEVLVEVAEDEDFE
CTGRAAHQAPDVDGECVFERGSGLAVGDLVKAVVVGTEGADLVVSAREQVPRSTLARATA
GVSGSGG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccccacgtcgcgccgccctgctcaccctgggctgtgcccgcaacgaggtcgac
tcggaggagatcgccggccggctgaccgacagcgggtgggagctcgtcgacgccgacgac
ggcgccgacgtgatcctggtcaacacgtgcggcttcgtcgagcaggccaagaaggactcc
atcgacacgctgctcgccgcgtcggactccgcgcaggagagcggcgcgaaggtcgtcgcc
gtcgggtgcctggccgagcgctacggcaaggagctcgccgaccagctccccgaggccgac
gccgtgctcggcttcgacgcctaccccgacctcgccgagcgcctgggcgacgtcctcggc
ggccacgcgcccgccgcgcacgtccccgtcgaccgccgcacgctgctgccgatctccccg
gtcgagcggcccgccgcgtccgccgacgtcgccgtccccgggcacgcctgggttcccaac
ctcgcccgcacccgcctcaccgagggcccggtcgccaacctcaagctcgcctcgggctgc
gaccgccgctgcaccttctgcgccatcccgtccttccgcggctcgttcgtctcgcgcccg
gccgacgacgtcgtcgccgaggcggcgtggctgggcatggagggcgtgcgcgagctgtac
ctcgtcagcgagaactccacgtcctacggcaaggacctgcccggcggcacgcgcgcgctg
gtccggctgctgccgcggctcacgcaggtgcccggcatcgaccgcgtccgcgtcagctac
ctgcagcccgccgagatgcgccccgacctcatcgaggtgatcgcctcgacgcccggcgtc
gcgccgtacttcgacctgtcgttccagcacgccgcgcccacgctgctgcgccggatgcgc
cgcttcggctcgcgcgccgacttcctcgacctgtgcgcacgcatccgcgccctcgccccc
gaggcggggatccgcagcaacttcatcgtcgggttcccgggggagaccgacgaggagttc
gccgagctggaggcgttcctgtccgaggcccggctcgacgcggtgggcctgttcggctac
tccgacgaggacggcaccgaggccctctcgctgcccgacaaggtgccggccgaggtgatc
accgagcgcctggcgcggctgtcgtcgctggtcgaggagctgatgagccagcgggccgag
gagcggatcggcaccgaggtcgaggtgctcgtcgaggtcgccgaggacgaggacttcgag
tgcaccgggcgggccgcgcaccaggcgcccgacgtcgacggggagtgcgtgttcgagcgc
ggctccgggctggcggtcggcgacctggtgaaggcggtcgtcgtcggcaccgagggggcc
gacctggtcgtctccgcacgggagcaggtcccgcgcagcaccctggcgcgcgccacggcg
ggcgtgtcggggagcggggggtga
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