KEGG   Paraburkholderia bryophila: NDK50_16560
Entry
NDK50_16560       CDS       T08797                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pbry  Paraburkholderia bryophila
Pathway
pbry00740  Riboflavin metabolism
pbry01100  Metabolic pathways
pbry01110  Biosynthesis of secondary metabolites
pbry01240  Biosynthesis of cofactors
pbry02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pbry00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NDK50_16560 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NDK50_16560 (ribD)
Enzymes [BR:pbry01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NDK50_16560 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NDK50_16560 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC3
Other DBs
NCBI-ProteinID: WCM19021
LinkDB
Position
1:3688241..3689398
AA seq 385 aa
MFSQTDFVHMERALALAKRGLYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQDHAEIRALK
DARSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAI
LRDAGIEVRCGLLAQEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGE
AARADGHAWRARASAILTGIGTVREDNPRMTVRAVDTPRQPQRVLIDSQLDVPPEAQILA
GAPTLIFCGNLDQRHTERASVLRDRGAEIVQLANPAGKVDLPAVLNALGQRNVNELHVEA
GYKLNGSLLREGCVDELLVYLAPSLLGMDSMSMFNLSAPDTLEGRVKLNFHAVDRIGDDL
RILARFTPHGAGEPGTDPASEPITN
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgttctcgcaaaccgacttcgttcatatggaacgcgcgctcgctcttgcgaagcgcggc
ctgtacaccaccgatcccaacccgcgggtcggctgcgtgctcgtgaagaacggcgaagtg
atcggcgaaggcttcacgcaaccggccggccaggatcatgcggaaatccgcgcgttgaaa
gacgcgcgttcgcgcggtcacgatctgcgcggcgccaccgcttacgtcacgcttgaaccg
tgcagccacttcggccgcacgccgccgtgcgcgaacgcgttgatcgaagcgcaggtcgcg
cgcgtggtcgcggcgatggaagatcccaatccgcaagtgtccggccgcggcctcgcgatc
ttgcgcgacgccggtatcgaagtgcgttgcggactgctggcgcaggaagcgcatgagttg
aacatcggtttcgtgtcgcgtatgacgcgcggccgcccatgggtgcgcatgaaggtggcg
gcgtcgctggacggccgcaccggcttgccgtccggcgtcagccagtggatcaccggcgaa
gcggcgcgcgccgatggtcacgcgtggcgcgcccgggcctcggcgattctgacgggtatc
ggcaccgtcagggaagacaatccgcgcatgaccgtgcgcgccgtcgacacgccgcgccag
ccgcaacgcgtgttgatcgacagtcagctcgacgtgccgcccgaggcgcagattctggcc
ggcgcgcccacgctgattttttgcggcaatctggatcagcgtcataccgaacgcgccagt
gtgctgcgcgatcgcggcgccgagatcgtccaactggcgaaccccgccggcaaggtcgat
ctgcccgccgtgctgaacgcactgggccaacgcaacgtgaacgaactgcatgtcgaggcg
ggttacaagctgaacggctcgctactgcgcgaaggctgcgtcgacgaactgcttgtgtat
ctcgcgccgagcctgctcggcatggactcgatgagcatgttcaatctgagcgcgccggac
acgctggaaggccgcgtcaaactgaattttcacgcggtcgaccggatcggcgacgatctg
cggatcctcgcgcgcttcacgccgcacggcgcgggcgagcccggcaccgaccccgcgtct
gaacccattaccaattga

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