Paraburkholderia bryophila: NDK50_20725
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Entry
NDK50_20725 CDS
T08797
Name
(GenBank) L-serine ammonia-lyase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00260
Glycine, serine and threonine metabolism
pbry00270
Cysteine and methionine metabolism
pbry01100
Metabolic pathways
pbry01110
Biosynthesis of secondary metabolites
pbry01200
Carbon metabolism
pbry01230
Biosynthesis of amino acids
Module
pbry_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NDK50_20725
00270 Cysteine and methionine metabolism
NDK50_20725
Enzymes [BR:
pbry01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
NDK50_20725
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Motif
Pfam:
SDH_alpha
SDH_beta
PT-VENN
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
WCM19805
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Position
1:4580694..4582082
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AA seq
462 aa
AA seq
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MAVSVFDLFKIGIGPSSSHTVGPMRAALMFAQGLERDGLLDNTASVKVDLYGSLGATGKG
HGTDRGVMLGLMGDAPDTVDPDTIAQRLEAVRVTRKLALLGTHEVPFVLKEQISFYRQAL
TEHPNGLKLRALDAQGETLRESTYLSVGGGFVVTAGAPNTKVLSAVDQLPHSFRSGNELL
ALCESTGKSIAQLMWENERAWHTEEETRTGLMKIWDVMQSCVSRGCGINNPDADGNLPGP
FQVKRRAPQLYRALSGNPELALRDPLSMVDWINLYAIAVNEENAAGGRVVTAPTNGAAGI
IPAVLHYYVRFMPGSNQQGVIDFLLTAAAIGILYKLNASISGAEVGCQGEVGVACSMAAG
ALAAVMGGTPRQVENAAEIGMEHNLGLTCDPVGGMVQIPCIERNAMGSVKAVNAARMALR
GDGTHYVSLDSVIKTMMQTGADMKTKYKETSRGGLAVNIVEC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagcgtgttcgatctcttcaaaatcggcattggtccgtccagttcgcatacg
gtcgggccgatgcgcgcggcgctgatgttcgctcaagggcttgaacgcgacgggctgctc
gacaacaccgcgtcggtgaaggtggatctgtatggttcgctcggcgccaccggcaagggc
cacggcacggatcgcggcgtcatgctcggcctgatgggcgacgcacccgacaccgtcgac
cccgacacgatcgcgcaacggctcgaagccgtgcgggtcacgcgcaagctcgcgctgctc
ggcacgcacgaggtgccgttcgtgctgaaagagcagatttcgttttatcgccaggcgctg
accgagcatccgaacggcctgaagctgcgcgcgctcgacgcgcaaggcgagacgttgcgc
gagtcgacctatctgtcggtgggcggtggctttgtggtgacggccggtgcgccgaatacg
aaggtgctgagcgccgtcgatcaactgccgcactcgtttcgcagcggcaatgaactgctc
gcgctgtgcgaatcgaccggcaagagcatcgctcagttgatgtgggaaaacgaacgtgcc
tggcatacggaagaggaaacgcgcaccggcctgatgaagatctgggacgtgatgcagtcg
tgcgtgtcgcgcggttgcggcatcaacaatccggatgccgacggcaatctgccgggtccg
ttccaggtgaagcgccgcgcaccgcagttgtatcgcgcgttgtcgggcaatccggaactc
gcgctgcgcgatccgttgtcgatggtcgactggatcaatctctacgcgatcgccgtcaac
gaggaaaacgccgcgggcggccgtgtggtcaccgcgccgaccaacggcgcggccggcatc
attccggcggtgctgcattattacgtgcgcttcatgccggggtcgaaccagcaaggcgtg
atcgattttctgctgacggctgcggcgatcggcattctgtacaagctgaacgcgtcgatt
tcgggtgcggaagtgggttgccagggtgaagtgggcgtcgcgtgttcgatggcagcgggc
gcgctcgccgcagtaatgggcggcacaccgcgacaagtcgagaacgcggcggagatcggc
atggagcacaacctcgggctcacgtgcgatccggtcggcggcatggtgcagattccgtgt
atcgagcgtaatgcgatgggttcggtcaaggcggtcaacgccgcgcgcatggcgctgcgc
ggagacggcacgcattacgtgtcgctcgactccgtcatcaagacgatgatgcagaccggt
gcggatatgaagaccaagtacaaggaaacgtcgcgcggcgggttggcggtgaatatcgtc
gagtgttga
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