Paraburkholderia bryophila: NDK50_29325
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Entry
NDK50_29325 CDS
T08797
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00260
Glycine, serine and threonine metabolism
pbry01100
Metabolic pathways
Module
pbry_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NDK50_29325
Enzymes [BR:
pbry01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
NDK50_29325
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
NDK50_29325
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
NAD_binding_7
Pyr_redox
FAD_binding_2
HI0933_like
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WCM22132
LinkDB
All DBs
Position
2:complement(1832135..1835137)
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AA seq
1000 aa
AA seq
DB search
MSQTDRLPNGGRINRAMPLTFTFNGRQYQGYQGDTLASALLANGVHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEIELYQGLVATSVNAKPSIEKDRMAVNQKFARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEHNDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLIDDQPELGGSLLSCRAEIDSKPALQWVHKIEDELRQMPEVKILC
RSTAFGYQDHNLVTVTQRLTDHLPVTQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVTVVDPRPSESKG
TLPALARRYGVKVLNGVAITAAHGKLRVASVELASYAKGQLGARQGDLPCDLLAMSGGWS
PVLHLFAQSGGKAHWHDDKACFVPGKAMQPETSVGACAGDFTLGQGIRFAMDAGIEAARA
AGFIVTQPNPVQVAEITEAKMQPLWLVGGRELATRGPKQFIDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYFPKGGEDMHAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
EDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
YDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDVGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLPEDSSFVIPEGSQIVAGPFQGDTAPMLGHVTSSYYSPILKRSIAMAVVK
GGLDRIGETVTIPLASGKQMAAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacagaccgactccccaatggcgggcgcatcaatcgcgccatgccgctgacg
ttcacgttcaacggccgccagtatcagggctatcagggcgacacgctggcctcggcgctg
ctcgcgaatggcgtgcatttcgtggcgcgtagctggaaataccatcggccgcgcggcatc
gtgacggcgggggtggaagagccgaacgcggtcgtgcaactggaaaccggcgcctacacg
gtgccgaacgcacgcgcgaccgaaatcgagttgtatcagggactggtcgccaccagcgtt
aacgcgaagccgagcatcgagaaagatcgcatggccgtgaatcagaagttcgcgcgcttc
attccggcgggcttctactacaaaaccttcatgtggccgcgcaagttctggccgaagtac
gaagaagtgattcgcgacgccgccggtctcggcaaggcgcccgaacacaacgacgcggac
cgctacgacaagtgctttgcgcattgcgacgtgctggtggtgggcggcggtccgaccgga
ctcgcggcggcgcatgcggcggcgctgtccggcgcgcgcgtgacgctgatcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacagcaagcccgcgctg
cagtgggtgcacaagatcgaagacgagttgcggcagatgcccgaggtgaagatcctgtgc
cgcagcaccgcgttcggctatcaggaccacaacctcgtcacggtgacgcagcggctcacc
gaccatttgccggtgacgcaacgcaaaggcacgcgcgaactgatgtggaaaatccgcgcg
aagcgcgtgattctcgcgaccggcgcgcacgaacggccgatcgtgttcggcaataacgat
ctgccgggtgtgatgctggcgtcggcggtgtcgacctatctgcatcgttacgcggtgctg
ccgggtcgtaacgcggtggtgttcacgaacaacgacgacggctatcaatgcgcgctcgac
ctgaaagcggccggtgcccaggtcacggtggtcgatccgcgtccgagcgaatcgaagggc
acgttgccggcgcttgcacggcgctacggcgtgaaggtgttgaacggcgtcgcgatcacg
gcggcgcacggcaaactgcgggtggcgtcggtggaactggcgtcgtatgcgaagggccag
ctcggcgccaggcagggtgatttgccgtgcgatctgctggccatgtcgggcggctggagc
cccgtgctgcacctgttcgcgcaatcgggcggcaaggcgcactggcatgacgacaaggcc
tgtttcgtgccgggcaaggccatgcagccggagaccagcgtcggcgcctgcgcgggcgac
ttcacgctaggtcagggcatccgctttgcgatggatgccggcatcgaggcggcacgcgcg
gccggctttatcgtgacgcagcccaatccggtgcaggtggccgaaatcaccgaagcgaaa
atgcagccgctgtggctggtcggcggtcgtgagctggccacgcgtgggccgaagcagttc
atcgatttccagaacgacgtgtcggccgcggatatttttctcgccgcccgcgaaggcttc
gaatcggtcgaacatgtgaagcgttatacggcaatgggtttcggtaccgaccagggcaag
ctcggcaacatcaacggtatggcgattctcgcccaggcactcggcaagacgattcccgag
accggcacgaccaccttccgtccgaactacacgccggtcacgttcggcacgttcgccggc
cgtgagctgggcgagtttctcgacccggtgcgcaaaaccgcggtgcacgaatggcacgtg
gaaaacggcgcggccttcgaggatgtcggcaactggaagcgtccgtggtatttcccgaaa
ggcggcgaggacatgcacgccgcggtggcgcgcgaatcgctcgcggtgcgcacgagcgtc
ggaattctcgacgcgtcgacgctcggcaagatcgacattcagggccccgattcggcgaaa
ctgctgaactgggtctacaccaatccgtggagcaagctggaagtcggcaagtgccgttac
ggcctgatgctcgacgaaaacggcatgattttcgacgacggcgtgacggtgcgcctcgcc
gaccagcactacatgatgacgaccaccaccggcggcgccgcgcgcgtgctgacgtggctc
gaacgctggctgcagacggaatggccggacatgcgcgtgcggctcgcctcggtcacggat
cattgggccaccttcgccgtggtgggaccgaacagccgcaaggtgctgcagaaagtgtgc
gaggacatcgacttcgcgaacgcggcgttcccgttcatgagctatcgcgaaggcacagtg
gccggcgccgcgtcgcgggtcatgcgcatcagtttctcgggcgaactcgcctatgaagtc
aacgtgccggcgaacgtcggccgcgcggtctgggaagcgctgatggcggcgggcgccgag
tacgacatcacgccgtacggtacggaaaccatgcacgtgttgcgcgcggagaagggctac
atcatcgtcggccaggatacggacggctcgatgacaccgtacgacgtcggcatgggcggg
ctggtcgcgaagtcgaaggactttctcggcaagcgctcgctgacgcgctcggacaccgcg
aaggccggccgcaagcaactggtcgggctgctgccggaggattcgtccttcgtgattccg
gaaggctcgcagatcgttgccgggccgttccagggcgacaccgcgccgatgctcggtcac
gtcacgtcgagctattacagcccgatcctgaagcgttcgattgcaatggcggtcgtcaag
ggcggcctcgacaggatcggcgaaacggtcacgattccgcttgcgagcggcaaacagatg
gcagcgaagatcaccagctcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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