Pieris brassicae (large cabbage white): 123710186
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Entry
123710186 CDS
T08632
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123710186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123710186
Enzymes [BR:
pbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123710186
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123710186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Nop14
Motif
Other DBs
NCBI-GeneID:
123710186
NCBI-ProteinID:
XP_045517896
EnsemblRapid:
ENSPBSG00000004727
LinkDB
All DBs
Position
5:complement(6238489..6244029)
Genome browser
AA seq
1648 aa
AA seq
DB search
MNVDINLSSALKGLVSVDPESVQFLTFSDEDVKQLSVVKITNSQSFDSLGNATRGGLYDP
LMGPIRDRNDECATCGNILLNCPGHFGHIELPLVVANPLYIKNMYILFRASCLKCYKIQL
DDKLRFILKLQLDLLDAGHVTAALDLENFVIDMKDKSASPDKPHKTIRKYQKLLKKTDPV
TKTFQNKNIDKLRGKVINHYFKAINTLKNCIFCRNRLIKVTTSDNKIMYNTSAECGTKGG
SIKIMMPDELQQICASIAENNEDVLMYCLPILKYSKVQPITDIFFMKVLPVLPINVRPCN
VLRGEIMENPQSKVYQAILKKSLAARVILQIMKSTDQSKTIGQLNTELRQAYESSPGASP
AEKLHTCWQELQRNVNEILNCEGTGVVSQGLKQVIEKKQGVIRMHMMGKRVNFAARSVIT
PDPNLDIDEIGIPDAFATKLTYPVPVTEWNVHELRKMVINGPNVHPGAEKIEIRNGRTIR
IPPDCINKRKSLAKRLLTPEEYKKSDLKIVHRHLINGDVLILNRQPSLHKPSMMAHRARI
LKGEKTIRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVRKQYLVPKDGTPLS
GLIQDHVISGVRMSLRGTFFSKADYQQLVFQALSSHRGEIKLLPPTILKPVLLWSGKQVL
STIIINSIPKGKAYLSLVGKAKIGDKAWQKVPARTWIAGGTPLETNDLSEAQVIIRKGEL
LCGVLDKTHYGATPYGLVHCMYELYGGDSSTALLSSFSKVFTFYLQWIGFTLGVKDILVV
EEANKKRDEIVQLVRQIGKVAAVKATDLPADIDDNVLKETIGELMAKDPKFRANLDRQYK
NMLDSYTNNINTVCLSQGLLEKFPSNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRP
PLMISGRSLPSFPPYEVSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLSVAYDHTVRDADGSVIQFAFGEDGLDVLKCQYLKRSQLPFLDINSNA
VVGKSVIKKLKEDGDIKIVAKAQKSLKKWKKRHGNPTDKEKSNGFALFSIQTKKDIKLDE
MPTDQTRDPYYWELENLWRSLDEDEKAQYTRKRCPDPIPSKMSPEYKFGVINEQLDGLIQ
NYLKNRNKNMFNEYTDNDKFDEVMNAKYLASMAAPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGDMNVTLGIPRLREILMTASVNVKTPNMDIPFYGNISGLTQKAEKLRKKMNRVTVS
DILEKIDIECEIVTQPDRKLKTIMRFYFLPYNQYKTQYSVKPSQIIKHMQKKFFTEMFTI
IRKQAKGNSGIAWSTEKKKKKKLSSDDEDDDPQDEPVKKSVNIDDSSDEEGPNDDDDNTE
VKLRNKRAEEQEYEDPESDEEEKSDEEVENDDESVKERDDTQNISVADSKAMADVVERIS
HATNYIFDTKNHQWCELTVLFPISFLRIDLTQALREAATKSVIYEIKNIRRAITNTEKGV
LFLRTEGINIVQMFKYNDLLDLNKLYSNDIHAIANTYGIEAANKVIIKEIQNVFNVYGIE
VDPRHLSLIADYMTYNGIFEPMSRKGMEASSSPLQQMSFESSLIFLKEAVLNAKVDNLRS
ASSCLMLGQPCRSGTGAFSLQLCSKVIS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggatataaatctatcttcggccttaaaggggctagtgtcggttgatcctgaa
tctgttcaatttcttacattctctgatgaagatgttaaacaacttagtgttgtaaaaata
accaactctcagtcttttgattccttaggcaatgccacacgaggaggtctctatgaccct
ttgatggggccaataagagatagaaatgatgaatgtgctacttgtggaaacattttgtta
aactgccctggccattttggacatattgagctacctttggtagtagctaatccactttat
attaaaaatatgtacatcttattccgtgcttcttgcttaaaatgctacaaaattcagcta
gatgataaactaagatttattcttaagttacaattagatcttctggatgctggacatgtt
acagctgccttggatctcgaaaattttgtaattgatatgaaagataagtctgcctctcca
gataaaccgcacaaaacaattcgaaaatatcagaaactgcttaaaaagacagacccagta
acaaagacatttcaaaataagaacattgataaactaagaggtaaagtaataaatcattat
ttcaaagcaataaatactttgaaaaattgtattttctgtagaaacagattaataaaagtt
acaacttctgataataaaataatgtataatacaagtgcagaatgtggcactaaaggtggc
agtataaaaataatgatgccagatgaattgcaacaaatttgtgcttcaatagcagaaaat
aatgaagatgttttgatgtattgtctacccattttgaaatattcaaaagtacaaccaatt
actgatatatttttcatgaaagttttgccagttttaccaatcaatgtgagaccgtgcaat
gttttaagaggtgaaattatggaaaaccctcaaagcaaagtatatcaagctattctgaaa
aagtcccttgcagctcgagtaatccttcaaataatgaaatcaacagatcaaagcaaaacc
attggtcaattgaatacagagttaagacaggcttatgaatcttcacctggggcatctcca
gcagagaaattacacacctgttggcaagaacttcagagaaatgttaatgaaatactaaat
tgtgaaggaactggggttgtgtctcaaggattaaaacaggttatagaaaaaaaacagggg
gttattagaatgcatatgatgggcaaaagagtgaattttgcagcacgctctgtcattact
cctgatcctaacttagatatagatgaaattggtatccctgatgcttttgcaacaaaatta
acttatccagtaccagtcactgaatggaatgttcatgaattgagaaaaatggtaataaat
ggacctaatgtacatccaggtgctgaaaaaatagagattagaaatggcaggacaatacga
atcccaccagattgtataaataaaaggaaaagtcttgctaagcggttactcactccagaa
gaatataagaagagtgatctgaagattgttcacaggcatttaatcaatggtgatgtatta
atattgaaccgtcaaccatctctacataaacccagtatgatggcacatagggctagaata
ttaaaaggagaaaagactattcgattacattatgctaattgtaaatcctacaatgctgac
tttgatggtgatgaaatgaatgcacattttccacaaaatgaaattgcaagaagtgaagca
tataatattatgtcagtccgaaagcaatatctagttccgaaagatggtacaccattaagt
ggtttgattcaagatcatgttatttctggggtgcgcatgtctttacgtggcacatttttt
tctaaggctgattatcaacaattagtgtttcaagctttatctagccatagaggtgaaata
aaattactgcctccaaccattttaaaaccagtattattatggtcaggcaaacaggttctt
tcaacaataataataaatagcattccaaagggtaaagcatatttatcattagtagggaaa
gcaaaaatcggtgataaagcgtggcagaaggtgccagctaggacttggattgcaggaggc
acaccacttgaaacaaatgatttgtcagaagcacaagtaattattcgaaaaggagaactt
ttatgtggtgttttagacaaaactcattatggtgcaactccatatggtttagttcactgt
atgtatgagttatatggtggtgattcctcaacagcattactcagttccttttcaaaagtt
tttacattctaccttcagtggattgggtttactttgggtgtcaaagacattttggttgtt
gaagaagctaataaaaagagagatgaaattgtgcaactcgtaaggcaaattggtaaagtt
gctgcagtaaaagccactgatctgccagcagatattgatgacaatgtacttaaagaaact
attggagaattgatggctaaagatcctaaatttcgtgctaatcttgatagacaatataaa
aatatgcttgattcttacacgaataatattaacactgtttgtttatctcaaggtttatta
gaaaaatttccatcaaataatcttcaattgatggtacagtctggtgccaaaggttccaca
gttaatactatgcagatttcttgtttgcttgggcaaattgagttggaaggtaaaaggccc
ccattgatgatatctggtagatctttgcccagttttcctccttacgaagtttcaccaaga
gcgggaggatttatagatggtcgctttatgacaggtattcaacctcaggaattttttttc
cactgtatggcaggacgtgaaggtcttattgacacagctgtgaaaactagtcggtcaggc
tatttacaaaggtgccttataaaacatttagaaggtttgagtgttgcgtatgatcatacc
gtgcgtgacgctgatggaagtgtgatacaatttgcatttggcgaagatggattagatgta
ttaaaatgccaatatctaaaacgcagccaattaccattccttgacataaattctaatgca
gttgttggtaaatcagttattaaaaagcttaaggaagatggtgacattaaaattgtagcc
aaagctcaaaaatctttaaaaaagtggaagaaaaggcatggaaatcctacagataaagag
aaatcaaatgggtttgcacttttttctatccagaccaagaaagacatcaaactggacgaa
atgccgactgaccaaacacgtgacccctattattgggaattagaaaatttgtggagatca
ttagatgaagatgagaaggcacagtacaccagaaaacggtgtccagacccaataccaagt
aaaatgtctccagagtataaatttggtgttataaatgaacaattagatggtcttattcaa
aactacttaaaaaatcgcaataaaaacatgttcaacgagtacactgacaatgataaattc
gacgaagttatgaatgcaaaatatctagcatctatggcagcaccaggagaacctgttggc
ttattagctgctcaatctattggagaaccttcaacccagatgaccttgaatactttccat
tttgccggtagaggggacatgaacgtaacactgggtattccgcgtctaagagaaattctt
atgactgcttctgtaaacgttaaaactcctaatatggatataccattctacggcaatata
tcaggcttgacccaaaaagcagaaaaactacgaaagaaaatgaaccgcgttaccgtatcc
gatattctggagaaaatagatatagaatgcgaaattgttacgcagcctgacaggaaatta
aagacaattatgcggttttattttctgccatataatcaatataaaactcagtactcagtg
aaaccttcgcaaataataaaacacatgcaaaaaaaatttttcacagaaatgtttacaatt
atccgtaaacaagccaagggtaatagtggaattgcatggtctactgaaaaaaagaaaaaa
aagaagctttctagtgatgatgaagatgatgaccctcaagatgaaccagtaaagaagtct
gttaatattgatgacagttcagatgaagagggcccaaatgatgatgatgataatacagag
gtaaagctgcgaaataagcgtgctgaagaacaagaatatgaagatccagaatcagatgaa
gaggagaaatctgatgaagaagttgaaaatgatgacgaaagtgttaaagaacgtgatgat
acacaaaacatctctgttgccgacagtaaagcaatggctgacgtcgtggagcgaattagt
catgcgaccaattatatattcgacaccaaaaaccaccaatggtgtgaactaactgttctc
tttcctatatccttcctacgaattgatcttactcaagcgttgcgtgaagctgctacaaaa
tcggtcatttacgaaatcaagaacattaggcgagcaattactaatactgaaaaaggagtt
ttatttttaaggactgaaggaataaatatcgtgcaaatgttcaagtacaatgatttgctg
gatttgaataaactctacagtaatgacatacatgcaattgccaatacgtacggaatagag
gcagcaaataaagttataattaaagaaatccaaaacgtatttaatgtatatggcattgaa
gttgatccgcgacatttgtcactgatagcggattatatgacttacaatggaatctttgag
cccatgagtcgtaaaggtatggaggcatcatcgtcgcccctacagcaaatgtcatttgaa
tcatcacttatatttttgaaggaggcagttctaaatgccaaagtagataatttacgctca
gcgtctagttgtcttatgttaggacagccgtgccgcagtggaacaggtgcttttagttta
caactttgtagtaaagttataagttag
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integrated database retrieval system
