Syntrophotalea carbinolica: Pcar_0441
Help
Entry
Pcar_0441 CDS
T00285
Symbol
shc-2
Name
(GenBank) squalene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00909
Sesquiterpenoid and triterpenoid biosynthesis
pca01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Pcar_0441 (shc-2)
Enzymes [BR:
pca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
Pcar_0441 (shc-2)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
Pcar_0441 (shc-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-ProteinID:
ABA87701
UniProt:
Q3A7E3
LinkDB
All DBs
Position
536276..538489
Genome browser
AA seq
737 aa
AA seq
DB search
MDKIKMKNINQPKFRVFRGGQKAATPCPGTTNERRGALDRGRLSASLKHSREWLLSLQAD
AGNWVFALEADTTIASEYVMLQRFLGRPLAPELQQRLANYLLSRQLPDGGWPLYAEDGFA
NISTTVKAYLALKLLGYPTHCDPLVRARQIVLALGGAEKCNVFTRIALALFGQIPWRTTP
AMPVEIMLLPRWFYFHLSKISYWARTVVVPLLILYAKRPVCRLEPWEGIPELFVTPPDKL
GYLDVCKPGQWRKNVFIWVDRLTRKMVRCVPRRLHNLALRAAETWTREHMQGAGGIGAIF
PAMANAVMALRTLGCSPDDADYQRGLKALDDLLIDRCDVPPREDTPVSPCWCTGTSAAPM
LDPSPAGSHAQGGDQGICQPCASPIWDTGLALTALLEGGLDARHPAVDRAVRWLLDQQVD
VKGDWAQRVPNLEAGGWAFQFENALYPDLDDTSKVLMSLIRAGAMDNPGYRQELSRAINW
VIGMQNSDGGWGAFDVDNNYLYLNDIPFADHGALLDPSTADVTGRCIEMLAMAGFGRDFL
PIARGVDFLRREQEDFGGWYGRWGVNYIYGTWSALSGLIHAGEDLQAPYIRQAVGWLESV
QNPDGGWGETCYSYDDPALAGRGVSTASQTAWALLGLMAAGEVDNLAVRRGIQYLVEEQN
RAGGWDERHFTGTGFPRVFYLRYHGYSQYFPLWALGLYERLSSGNPSRQQMVRRAGPAGL
HLPVLDRRKKLRRKRKA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcaaaatgaaaaacataaaccagcccaaatttagagtttttcgtggtgga
caaaaagccgctacgccttgtccggggacgactaacgagagacgcggtgccctggatcgc
ggtcgtctgtcggcttccctcaagcattctcgcgaatggctgctttcgctgcaggccgac
gccggtaattgggtttttgcgttggaagcggataccaccatcgcttccgaatatgtgatg
ctgcaacgttttctcggtcgccctcttgcgcctgaattgcaacaacgtctggccaattat
ttactcagtcgtcaattgcccgacggtggctggccgttatatgcggaagacgggtttgcc
aatatcagcaccaccgtcaaggcttacctggcgcttaagctgttgggttacccgacccac
tgcgaccccctggtgcgggcgcggcaaatcgttttggccctcggcggtgccgaaaaatgc
aatgtgttcacgcgcatcgcgctggcgctgttcgggcagattccctggcgcacgactccg
gccatgccggttgaaatcatgcttttgccgcgctggttctattttcatttaagtaagatt
tcctattgggctcgtaccgtggtggtgccgttgctgattctgtacgccaaacgcccggtc
tgccgtctggagccctgggaagggatccctgagctgtttgtcacgccgccggataaactc
ggttacctcgatgtctgtaaacccggtcagtggcgtaaaaatgtctttatctgggtggat
cgcctgacccgcaaaatggtgcgctgtgtcccccggcgtctgcacaacctggcgctgagg
gctgcagagacatggacacgggagcatatgcagggcgccggaggtatcggggctattttc
ccggccatggccaatgccgtcatggcgctgcggactctgggctgctcgccggatgatgcc
gattatcagcgcggcctcaaggctctcgacgatctgctgattgaccgttgtgacgttcct
ccccgggaggatacgccggtttcgccgtgctggtgcacaggcacctcagccgctccgatg
ctcgatcccagccctgccggcagccatgcgcagggtggcgatcagggtatctgtcaacct
tgtgcgtcgccgatctgggatacgggacttgcccttacggcgctgcttgaaggggggctt
gatgccaggcatccggcggtcgatcgtgcggttcgctggctgctggatcagcaggtcgat
gtcaagggcgactgggcgcagcgggtgccgaacctcgaagcgggcggttgggcatttcag
ttcgaaaacgctctgtatcccgatctggacgataccagcaaggtgctgatgtccctgata
cgcgccggtgcgatggataacccgggctatcgacaggagctgtcgcgggctatcaattgg
gttatcggcatgcagaacagcgatggaggatggggtgccttcgacgttgacaataattac
ctttatttaaatgatatccctttcgccgatcatggggcgttgctcgatcccagtactgcg
gatgtgacggggcggtgcatcgaaatgctcgctatggcaggtttcggccgggattttttg
cccattgccaggggggtggatttcctgcgtcgtgagcaggaggacttcggcggttggtat
ggtcgctggggcgtgaactatatttatgggacctggtcggccctgtccgggttgatccac
gccggcgaggatttgcaggctccttatatccggcaggcggtgggctggcttgaatcggta
cagaacccggatggtggatggggcgaaacctgttattcctatgacgatcccgccctggcc
ggacgtggcgtcagcaccgcctcgcagacagcctgggcgctcctggggttgatggccgcc
ggcgaggtggacaacctggcagtgcggcgcgggattcagtatttggtggaggaacaaaac
cgagccgggggctgggatgaacgccatttcaccggaaccggtttccctcgggtcttttat
ttgcgttaccacgggtacagtcagtactttcccctctgggccctcggtctgtacgaacgg
ctcagctccgggaacccgagcaggcagcagatggtacggcgggcggggcctgccggtttg
catctgccggttctcgaccggcgcaaaaaactacgtcgcaagcgcaaagcgtaa
DBGET
integrated database retrieval system
