Syntrophotalea carbinolica: Pcar_1943
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Entry
Pcar_1943 CDS
T00285
Symbol
kdsD
Name
(GenBank) arabinose-5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00540
Lipopolysaccharide biosynthesis
pca01100
Metabolic pathways
pca01250
Biosynthesis of nucleotide sugars
Module
pca_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pcar_1943 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pca01005
]
Pcar_1943 (kdsD)
Enzymes [BR:
pca01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
Pcar_1943 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
pca01005
]
Lipid A
Pcar_1943 (kdsD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF3659
Motif
Other DBs
NCBI-ProteinID:
ABA89184
UniProt:
Q3A373
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All DBs
Position
complement(2256379..2257341)
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AA seq
320 aa
AA seq
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MLDTARRVLQVEADAIVAMAQRLDERFVAAVELILSCQGRVVITGMGKSGLICQKIAATM
ASTGTPAFFLHPAEGIHGDLGMLMKGDVVIAVSNSGNTEEIVRILPVIKRMGLPLIAMAG
HPESALARAADVLLNVAVREEACPLGLAPTASTTATLAMGDALAVALLERRGFREEDFAL
FHPGGALGKKLLLTVEDLMHTGSDIPLASLTTPLKDALFEISSKKLGITGVLNATGELVG
VFTDGDLRRTMGRGCDVLDLPLGDVMSCHPKRILRSNLAAKAVQKMEEFSITSLFVFDDD
DSTVPVGIIHLHDLLKAGVV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttggataccgccagacgggttctccaggttgaagccgatgccattgttgcaatggcg
cagcgactggatgaacgctttgttgccgccgtggaattgattctgtcctgccagggacgg
gtggtgattacggggatgggcaaatccgggctgatctgccagaaaatcgctgcgaccatg
gcttcaacgggtaccccggcgttttttttgcatcccgccgaagggatccacggcgacctg
ggtatgctcatgaagggcgatgtggtgatcgctgtgtccaattccggcaataccgaggag
atcgtacggattctcccggtgataaaacggatggggctgccgctgattgccatggccggt
catcctgaaagcgctctggcccgtgcggccgatgtgcttctgaatgttgccgtgcgcgaa
gaggcctgcccgttggggttggcgcccaccgccagtaccaccgccaccctggccatgggt
gacgctctggctgtggcgttgctcgaaagacggggattccgggaagaggatttcgccttg
ttccatcccgggggcgcccttggtaaaaaactgctgctcaccgtggaagacctgatgcat
accggcagcgatattcccctggcatccctaacgactccgctgaaggatgctcttttcgaa
atcagcagtaaaaaactgggcattaccggtgtgcttaacgcaacaggcgagttggtcggg
gtgtttacggacggggacctgcgccgtactatgggcaggggctgcgatgttctggatctg
cctttgggcgatgtcatgagctgtcaccccaagcgcattctgcgctccaatctggcggcc
aaggccgtgcagaagatggaggagttttcgattacctcgctgtttgtctttgatgatgac
gacagtacggtgccggtcggcatcatccatcttcatgatctgctcaaagcgggggtggtc
tga
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